Escherichia coli NCTC9016 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli NCTC9016 RM systems
Ref:
REBASE ref # 22501
GenBank #: CAADJX000000000
REBASE acronym: Eco9016
Org_num: 43791
All begin NCTC9016_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2793 | methylated adenine and cytosine restriction | |||
| 2794 | R | Ecos671ORFCP (100% identity) | CATNNNNNNCTCC | Eco9016IP |
| 2795 | M | M.SflFF12ORF17265P (100% identity) | CATNNNNNNCTCC | M.Eco9016I |
| 2796 | S | S.SflFF12ORF17265P (100% identity) | CATNNNNNNCTCC | S.Eco9016I |
| 2798 | 5-methylcytosine-specific restriction enzyme | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3790 | M | M.SenHNK130ORF11595P (72% identity) | M.Eco9016ORF3790P | |
| 3791 | membrane protein | |||
| 220 | DamX protein | |||
| 221 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco9016DamP |
| 222 | ribulose-phosphate 3-epimerase | |||
| 82 | lipoprotein | |||
| 83 | M | M.EcoS1283ORF8485P (100% identity) | A | M.Eco9016ORF83P |
| 89 | phage protein YjhS encoded within prophage | |||
| 2141 | DMT superfamily transporter inner | |||
| 2142 | V | V.SflFF64DcmP (100% identity) | V.Eco9016DcmP | |
| 2143 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco9016DcmP |
| 1177 | CPS-53 (KpLE1) prophage protein | |||
| ??? | M | M.EcoGRORF22720P (95% identity) | M.Eco9016ORF1178P | |
| 1180 | Crossover junction | |||
| 3025 | LexA repressor | |||
| 3026 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco9016ORF3026P |
| 3027 | CPS-53 (KpLE1) prophage protein | |||
| 3619 | prophage protein | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.Eco9016ORF3620P | |
| 3621 | IS5 transposase and trans-activator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2792 | GTP-binding protein YjiA | |||
| 2793 | R | Ssp28760MrrP (100% identity) | Eco9016MrrP | |
| 2794 | type I restriction enzyme EcoKI subunit R | |||
| 2796 | EcoKI restriction-modification system protein | |||
| ??? | R | EcoTO6McrBP (98% identity) | Eco9016McrBP | |
| 2799 | R | Ssp28760McrCP (99% identity) | Eco9016McrCP | |