Escherichia coli NCTC9003 |
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Putative Escherichia coli NCTC9003 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,995,259 bp
GenBank #: UGCQ00000000 (NZ_UGCQ00000000)
REBASE acronym: Eco9003
Org_num: 43780
All begin NCTC9003_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3792 | UvrD family helicase | |||
| 3793 | R | Sso8ORF18020P (100% identity) | GYTANNNNNGTC | Eco9003IP |
| 3794 | Uncharacterised protein | |||
| 3795 | S | S.EcoHs3II (100% identity) | GYTANNNNNGTC | S.Eco9003I |
| 3796 | M | M.EcoHs3II (100% identity) | GYTANNNNNGTC | M.Eco9003I |
| 3797 | Uncharacterised protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 428 | DamX protein | |||
| 429 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco9003DamP |
| 430 | ribulose-phosphate 3-epimerase | |||
| 555 | membrane protein | |||
| 556 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco9003ORF556P |
| 557 | DNA-binding protein Fis | |||
| 2009 | prophage protein | |||
| ??? | M | M.EcoB1109aORFBP (100% identity) | GCCGGC | M.Eco9003II |
| 2011 | R | EcoZ910ORF13770P (100% identity) | GCCGGC | Eco9003IIP |
| 2012 | phage protein | |||
| 2052 | phosphohydrolase | |||
| 2053 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.Eco9003DcmP |
| 2054 | V | V.SsoSE61DcmP (100% identity) | V.Eco9003DcmP | |
| 2055 | DMT superfamily transporter inner | |||
| 2456 | Exonuclease RNase T and DNA polymerase III | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.Eco9003ORF2457P | |
| 2458 | membrane protein | |||
| 3195 | replication protein for prophage | |||
| 3196 | M | M.Sen075ORF1078P (100% identity) | GATC | M.Eco9003ORF3196P |
| 3197 | RNA-binding protein | |||