Escherichia coli NCTC8603 |
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Putative Escherichia coli NCTC8603 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,359,234 bp
GenBank #: UGEE00000000 (NZ_UGEE00000000)
REBASE acronym: Eco8603
Org_num: 43770
All begin NCTC8603_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4346 | Uncharacterised protein | |||
| 4347 | S | S.EcoECB1ORF9045P (100% identity) | TGANNNNNNCTTT | S.Eco8603I |
| 4348 | M | M.EcoDEC2DORF4922P (100% identity) | TGANNNNNNCTTT | M.Eco8603I |
| 4349 | R | EcoECB1ORF9045P (100% identity) | TGANNNNNNCTTT | Eco8603IP |
| 4350 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 184 | Uncharacterised protein | |||
| 187 | M | M.EcoDEC1CORF2007P (100% identity) | M.Eco8603ORF187P | |
| 188 | recombination associated protein | |||
| 442 | TraR/DksA family transcriptional regulator | |||
| 443 | M | M.EcoZ01ORF1668P (100% identity) | GATC | M.Eco8603ORF443P |
| 444 | replication protein for prophage | |||
| 636 | protein NinB | |||
| 637 | M | M.EcoSC477ORFCP (100% identity) | GATC | M.Eco8603ORF637P |
| 638 | DNA-binding protein from phage origin | |||
| 883 | lipoprotein | |||
| 884 | M | M.EcoS7438ORFNP (100% identity) | M.Eco8603ORF884P | |
| 888 | anti-adapter protein IraM | |||
| 1808 | DMT superfamily transporter inner | |||
| 1809 | V | V.EcoDEC2EDcmP (100% identity) | V.Eco8603DcmP | |
| 1810 | M | M.EcoSC477DcmP (100% identity) | CCWGG | M.Eco8603DcmP |
| 1811 | phosphohydrolase | |||
| 3234 | DNA-binding protein Fis | |||
| 3235 | M | M.EcoS6995ORFBP (100% identity) | ATGCAT | M.Eco8603II |
| 3236 | membrane protein | |||
| 3341 | ribulose-phosphate 3-epimerase | |||
| 3342 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco8603DamP |
| 3343 | DamX protein | |||
| 4540 | LexA repressor | |||
| 4541 | M | M.EcoDEC1CORF3567P (100% identity) | M.Eco8603ORF4541P | |
| 4542 | insertion sequence IS100, ATP-binding protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4585 | helicase | |||
| 4586 | M | M.EcoR71ORF22205P (100% identity) | M.Eco8603ORF4586P | |
| 4587 | R | EcoSCU172ORF3240P (100% identity) | Eco8603ORF4586P | |
| 4588 | Uncharacterised protein | |||