Escherichia coli NCTC7926 |
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Putative Escherichia coli NCTC7926 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,094,105 bp
GenBank #: UGAD00000000 (NZ_UGAD00000000)
REBASE acronym: Eco7926
Org_num: 43757
All begin NCTC7926_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1691 | 5-methylcytosine-specific restriction enzyme | |||
| 1693 | S | S.EcoNORFEP (100% identity) | AACNNNNNNGTGC | S.Eco7926I |
| 1694 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.Eco7926I |
| 1695 | R | Msa17ORFC2P (98% identity) | AACNNNNNNGTGC | Eco7926IP |
| 1696 | methylated adenine and cytosine restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5182 | YfdA | |||
| 5183 | M | M.Sfl7ORF23565P (100% identity) | M.Eco7926ORF5183P | |
| 5184 | cytoplasmic protein | |||
| 388 | DamX protein | |||
| 389 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco7926Dam |
| 390 | ribulose-phosphate 3-epimerase | |||
| 515 | membrane protein | |||
| 516 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco7926ORF516P |
| 517 | DNA-binding protein Fis | |||
| 1616 | site-specific recombinase, phage integrase | |||
| 1617 | M | M.EcoNI (100% identity) | CCTNNNNNAGG | M.Eco7926II |
| 1618 | C | C.Ema814ORF11595P (100% identity) | C.Eco7926IIP | |
| 1619 | R | Ema814ORF11595P (100% identity) | CCTNNNNNAGG | Eco7926IIP |
| 1620 | prophage polarity suppression protein | |||
| 2993 | lipoprotein | |||
| 2994 | M | M.SboBSORF1263P (100% identity) | A | M.Eco7926ORF2994P |
| 2998 | anti-adapter protein IraM | |||
| 3286 | phosphohydrolase | |||
| 3287 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.Eco7926DcmP |
| 3288 | V | V.SflSTLE3DcmP (100% identity) | V.Eco7926DcmP | |
| 3289 | DMT superfamily transporter inner | |||
| 3908 | Uncharacterized conserved protein | |||
| 3909 | M | M.Sen58011ORF9805P (100% identity) | M.Eco7926ORF3909P | |
| 3910 | prophage protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1689 | R | SenHNK130McrCP (100% identity) | Eco7926McrCP | |
| ??? | R | EcoNMcrBP (98% identity) | Eco7926McrBP | |
| 1693 | EcoKI restriction-modification system protein | |||
| 1695 | type I restriction enzyme EcoKI subunit R | |||
| 1696 | R | SenHNK130MrrP (100% identity) | Eco7926MrrP | |
| 1697 | GTP-binding protein YjiA | |||