Escherichia coli NCTC13452 |
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Putative Escherichia coli NCTC13452 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,868,343 bp
GenBank #: UFZB00000000 (NZ_UFZB00000000)
REBASE acronym: EcoC13452
Org_num: 43743
All begin NCTC13452_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4041 | methylated adenine and cytosine restriction | |||
| 4042 | R | Msa17ORFC2P (98% identity) | AACNNNNNNGTGC | EcoC13452IP |
| 4043 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.EcoC13452I |
| 4044 | S | S.Eco12655I (99% identity) | AACNNNNNNGTGC | S.EcoC13452I |
| 4046 | 5-methylcytosine-specific restriction enzyme | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 403 | DamX protein | |||
| 404 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoC13452Dam |
| 405 | ribulose-phosphate 3-epimerase | |||
| 531 | membrane protein | |||
| 532 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.EcoC13452ORF532P |
| 533 | DNA-binding protein Fis | |||
| 1858 | phosphohydrolase | |||
| ??? | M | M.Eco8003DcmP (99% identity) | CCWGG | M.EcoC13452Dcm |
| ??? | V | V.SflFF64DcmP (100% identity) | CCWGG | V.EcoC13452DcmP |
| 1860 | DMT superfamily transporter inner | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10 | isocitrate dehydrogenase | |||
| ??? | R | SsoSE61ORF22640P (100% identity) | YCGR | EcoC13452ORF11P |
| 13 | DNA invertase from prophage CP-933H | |||
| 2696 | isocitrate dehydrogenase | |||
| ??? | R | SsoSE61ORF22640P (100% identity) | YCGR | EcoC13452ORF2697P |
| 2698 | DNA invertase from prophage CP-933H | |||
| 4040 | GTP-binding protein YjiA | |||
| 4041 | R | SenHNK130MrrP (100% identity) | EcoC13452MrrP | |
| 4042 | type I restriction enzyme EcoKI subunit R | |||
| 4044 | EcoKI restriction-modification system protein | |||
| 4046 | R | Msa17McrB2P (92% identity) | EcoC13452McrBP | |
| 4047 | IS5 transposase and trans-activator | |||
| 4048 | R | SenHNK130McrCP (100% identity) | EcoC13452McrCP | |
| 4049 | DEAD-box helicase-like protein | |||