Escherichia coli NCTC13441 |
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Putative Escherichia coli NCTC13441 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,267,393 bp
GenBank #: UFZF00000000 (NZ_UFZF00000000)
REBASE acronym: Eco13441
Org_num: 21160
All begin NCTC13441_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4087 | Protein of unknwon function (DUF2893) | |||
| 4088 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | Eco13441IIP |
| 4089 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.Eco13441II |
| 4090 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.Eco13441II |
| 4093 | Uncharacterised protein | |||
| 4453 | restriction endonuclease | |||
| 4454 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.Eco13441I |
| 4455 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.Eco13441I |
| 4456 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | Eco13441IP |
| 4458 | protein YjiS | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 134 | YfdA | |||
| 135 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco13441ORF135P |
| 136 | cytoplasmic protein | |||
| 355 | PglZ domain | |||
| 356 | RM | EcosR9ORF15335P (99% identity) | CANCATC | Eco13441IV |
| 357 | ATPase-like protein | |||
| 667 | DamX protein | |||
| 668 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco13441Dam |
| 669 | ribulose-phosphate 3-epimerase | |||
| 789 | membrane protein | |||
| 790 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco13441ORF790P |
| 791 | DNA-binding protein Fis | |||
| 2240 | phosphohydrolase | |||
| 2241 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Eco13441DcmP |
| 2242 | V | V.SflC32DcmP (100% identity) | V.Eco13441DcmP | |
| 2243 | DMT superfamily transporter inner | |||
| 2940 | anti-adapter protein IraM | |||
| 2944 | M | M.EcosS9ORF10680P (100% identity) | A | M.Eco13441ORF2944P |
| 2945 | lipoprotein | |||
| 3389 | transcriptional repressor DicA | |||
| 3390 | M | M.KpnYN1ORFGP (100% identity) | M.Eco13441ORF3390P | |
| 3391 | Uncharacterised protein | |||
| 4519 | 5-methylcytosine restriction system component | |||
| 4520 | R | EcosS9ORF2810P (100% identity) | GGTCTC | Eco13441IIIP |
| 4521 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.Eco13441III |
| 4522 | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M2.Eco13441III |
| 4523 | transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4517 | glycosyltransferase | |||
| 4518 | R | EcosS3McrBP (100% identity) | Eco13441McrBP | |
| 4519 | R | EcosS9McrCP (100% identity) | Eco13441McrCP | |
| 4520 | restriction endonuclease | |||