Escherichia coli NCTC13148 |
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Putative Escherichia coli NCTC13148 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,176,811 bp
GenBank #: UGET00000000 (NZ_UGET00000000)
REBASE acronym: Eco13148
Org_num: 43735
All begin NCTC13148_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 229 | Insertion element protein | |||
| 230 | R | Eco6E9ORF1020P (99% identity) | CAGNNNNNCTGG | Eco13148IP |
| 231 | S | S.EcoC2159ORF22740P (64% identity) | CAGNNNNNCTGG | S.Eco13148I |
| 232 | M | M.Eco9008ORF1272P (74% identity) | CAGNNNNNCTGG | M.Eco13148I |
| 233 | antitoxin of P1 addiction system | |||
| 2598 | Uncharacterised protein | |||
| ??? | R | SenS12VPHORF19925P (99% identity) | ATGNNNNNNGTGG | Eco13148IIIP |
| 2604 | Uncharacterized conserved protein | |||
| ??? | restriction endonuclease subunit S | |||
| 2605 | S | S.SenS12VPHORF19925P (39% identity) | ATGNNNNNNGTGG | S2.Eco13148III |
| 2606 | S | S.Sen4025ORF5590P (26% identity) | ATGNNNNNNGTGG | S1.Eco13148III |
| ??? | M | M.SenS12VPHORF19925P (98% identity) | ATGNNNNNNGTGG | M.Eco13148III |
| 2611 | Uncharacterised protein | |||
| 2604 | Uncharacterized conserved protein | |||
| ??? | S | S.Sen4025ORF5590P (16% identity) | S3.Eco13148ORF2607P | |
| 2605 | type-1 restriction enzyme StySJI specificity | |||
| 2966 | Uncharacterized conserved protein (DUF2081) | |||
| ??? | M | M.EcoCPE35ORF5500P (99% identity) | GAGNNNNNNRTGC | M.Eco13148II |
| 2970 | S | S.Eko71753ORF3280P (55% identity) | GAGNNNNNNRTGC | S1.Eco13148II |
| 2971 | S | S.Sen0537III (29% identity) | GAGNNNNNNRTGC | S2.Eco13148II |
| ??? | R | Sen0537IIIP (99% identity) | GAGNNNNNNRTGC | Eco13148IIP |
| 2975 | Uncharacterised protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 208 | cytoplasmic protein | |||
| ??? | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco13148ORF209P |
| 211 | YfdA | |||
| 489 | Uncharacterised protein | |||
| ??? | M | M.Ero90065ORF6245P (84% identity) | M.Eco13148ORF490P | |
| 492 | Uncharacterised protein | |||
| 5333 | Uncharacterised protein | |||
| 5334 | M | M.Ype21801ORF197P (100% identity) | M.Eco13148ORF5334P | |
| 5335 | DNA-binding protein | |||
| 5450 | Uncharacterised protein | |||
| ??? | M | M.SenFC745ORF23370P (100% identity) | M.Eco13148ORF5451P | |
| 5452 | nuclease | |||
| 6044 | replication protein for prophage | |||
| 6045 | M | M.EcoEC0541ORF510P (100% identity) | M.Eco13148ORF6045P | |
| 6046 | TraR/DksA family transcriptional regulator | |||
| 6070 | Uncharacterised protein | |||
| 6071 | M | M.SglORF828P (100% identity) | M.Eco13148ORF6071P | |
| 6072 | phage-related membrane protein | |||
| 1534 | DMT superfamily transporter inner | |||
| 1535 | V | V.SflFF64DcmP (100% identity) | V.Eco13148DcmP | |
| 1536 | M | M.EcosEC29DcmP (100% identity) | CCWGG | M.Eco13148DcmP |
| 1537 | phosphohydrolase | |||
| 3551 | Uncharacterised protein | |||
| 3552 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco13148DamP |
| 3553 | DamX protein | |||
| 4845 | McrC family protein, McrBC 5-methylcytosine | |||
| 4846 | R | SflSTLE4ORF19250P (100% identity) | Eco13148ORF4846P | |
| 4847 | YjhS protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4843 | restriction methylase | |||
| 4844 | R | EcoHM107McrBP (100% identity) | Eco13148McrBP | |
| 4845 | R | SflSTLE4McrCP (100% identity) | Eco13148McrCP | |
| 4846 | restriction endonuclease | |||