Escherichia coli NCTC13127 |
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Putative Escherichia coli NCTC13127 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,711,890 bp
GenBank #: UGCM00000000 (NZ_UGCM00000000)
REBASE acronym: Eco13127
Org_num: 43733
All begin NCTC13127_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5720 | Uncharacterized conserved protein | |||
| 5721 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco13127IP |
| 5722 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco13127I |
| 5723 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco13127I |
| 5725 | Uncharacterized conserved protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13 | YfdA | |||
| ??? | M | M.EcosPA8ORF27775P (96% identity) | M.Eco13127ORF14P | |
| 15 | cytoplasmic protein | |||
| 187 | YfdA | |||
| 188 | M | M.SflC32ORFDP (100% identity) | SAY | M.Eco13127ORF188P |
| 189 | cytoplasmic protein | |||
| 708 | DamX protein | |||
| 709 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco13127Dam |
| 710 | ribulose-phosphate 3-epimerase | |||
| 835 | membrane protein | |||
| 836 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco13127ORF836P |
| 837 | DNA-binding protein Fis | |||
| 2663 | phosphohydrolase | |||
| 2664 | M | M.EcoMB411DcmP (100% identity) | CCWGG | M.Eco13127DcmP |
| ??? | V | V.EcosPA8DcmP (99% identity) | V.Eco13127DcmP | |
| 2667 | DMT superfamily transporter inner | |||
| 3718 | phage protein YjhS encoded within prophage | |||
| 3722 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco13127ORF3722P | |
| 3723 | lipoprotein | |||
| 5778 | helicase superfamily protein | |||
| ??? | RM | EcosPA8ORF17390P (99% identity) | GAAABCC | Eco13127II |
| 5784 | helicase domain-containing protein | |||
| 5791 | N-acetylneuraminate epimerase 2 | |||
| 5792 | R | Ecos1613ORF26795P (100% identity) | Eco13127ORF5792P | |
| 5793 | integrase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5723 | type I restriction-modification system subunit | |||
| 5725 | R | EcosPA8GmrSDP (55% identity) | Eco13127GmrDP | |
| 5726 | R | Ecos1613GmrSP (100% identity) | Eco13127GmrSP | |
| 5727 | protein YjiS | |||