Escherichia coli NCTC12654 |
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Putative Escherichia coli NCTC12654 RM systems
Ref:
REBASE ref # 22501
Contig set: 4,833,112 bp
GenBank #: UYIK00000000 (NZ_UYIK00000000)
REBASE acronym: Eco12654
Org_num: 43727
All begin NCTC12654_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2154 | 5-methylcytosine-specific restriction enzyme | |||
| 2156 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.Eco12654I |
| 2157 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.Eco12654I |
| 2158 | R | Msa17ORFC2P (98% identity) | AACNNNNNNGTGC | Eco12654IP |
| 2159 | methylated adenine and cytosine restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4632 | YfdA | |||
| 4633 | M | M.SflN92ORF24820P (100% identity) | M.Eco12654ORF4633P | |
| 4634 | cytoplasmic protein | |||
| 1004 | DNA-binding protein Fis | |||
| 1005 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.Eco12654ORF1005P |
| 1006 | membrane protein | |||
| 1134 | ribulose-phosphate 3-epimerase | |||
| ??? | M | M.EcoAHL1DamP (98% identity) | GATC | M.Eco12654Dam |
| 1136 | DamX protein | |||
| 4201 | DMT superfamily transporter inner | |||
| 4202 | V | V.SflFF64DcmP (100% identity) | V.Eco12654DcmP | |
| 4203 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco12654DcmP |
| 4204 | phosphohydrolase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2152 | DEAD-box helicase-like protein | |||
| 2153 | R | SenHNK130McrCP (100% identity) | Eco12654McrCP | |
| ??? | R | SenHNK130McrBP (100% identity) | Eco12654McrBP | |
| 2156 | EcoKI restriction-modification system protein | |||
| 2158 | type I restriction enzyme EcoKI subunit R | |||
| 2159 | R | SenHNK130MrrP (100% identity) | Eco12654MrrP | |
| 2160 | GTP-binding protein YjiA | |||
| 3314 | DNA invertase from prophage CP-933H | |||
| ??? | R | SsoSE61ORF22640P (100% identity) | YCGR | Eco12654ORF3315P |
| 3317 | isocitrate dehydrogenase | |||