Escherichia coli NCTC12653 |
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Putative Escherichia coli NCTC12653 RM systems
Ref:
REBASE ref # 22501
Contig set: 5,086,089 bp
GenBank #: UYIZ00000000 (NZ_UYIZ00000000)
REBASE acronym: Eco12653
Org_num: 43726
All begin NCTC12653_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 547 | methylated adenine and cytosine restriction | |||
| 548 | R | Msa17ORFC2P (98% identity) | AACNNNNNNGTGC | Eco12653IP |
| 549 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.Eco12653I |
| 550 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.Eco12653I |
| 552 | 5-methylcytosine-specific restriction enzyme | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 138 | cytoplasmic protein | |||
| 139 | M | M.SflN92ORF24820P (100% identity) | M.Eco12653ORF139P | |
| 140 | YfdA | |||
| 1557 | DamX protein | |||
| 1558 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco12653Dam |
| 1559 | ribulose-phosphate 3-epimerase | |||
| 1687 | membrane protein | |||
| 1688 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.Eco12653ORF1688P |
| 1689 | DNA-binding protein Fis | |||
| 3017 | phosphohydrolase | |||
| 3018 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco12653DcmP |
| 3019 | V | V.SflFF64DcmP (100% identity) | V.Eco12653DcmP | |
| 3020 | DMT superfamily transporter inner | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3958 | isocitrate dehydrogenase | |||
| 3959 | R | SsoSE61ORF22640P (100% identity) | YCGR | Eco12653ORF3959P |
| 3960 | DNA invertase from prophage CP-933H | |||
| 4992 | DNA invertase from prophage CP-933H | |||
| 4993 | R | SsoSE61ORF22640P (100% identity) | YCGR | Eco12653ORF4993P |
| 4994 | isocitrate dehydrogenase | |||
| 546 | GTP-binding protein YjiA | |||
| 547 | R | SenHNK130MrrP (100% identity) | Eco12653MrrP | |
| 548 | type I restriction enzyme EcoKI subunit R | |||
| 550 | EcoKI restriction-modification system protein | |||
| ??? | R | SenHNK130McrBP (100% identity) | Eco12653McrBP | |
| 553 | R | SenHNK130McrCP (100% identity) | Eco12653McrCP | |
| 554 | DEAD-box helicase-like protein | |||