Escherichia coli NCTC12652 |
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Putative Escherichia coli NCTC12652 RM systems
Ref:
REBASE ref # 22501
Contig set: 4,880,768 bp
GenBank #: UYIJ00000000 (NZ_UYIJ00000000)
REBASE acronym: Eco12652
Org_num: 43725
All begin NCTC12652_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4086 | methylated adenine and cytosine restriction | |||
| 4087 | R | Msa17ORFC2P (98% identity) | AACNNNNNNGTGC | Eco12652IP |
| 4088 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.Eco12652I |
| 4089 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.Eco12652I |
| 4091 | 5-methylcytosine-specific restriction enzyme | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 229 | cytoplasmic protein | |||
| 230 | M | M.SflN92ORF24820P (100% identity) | M.Eco12652ORF230P | |
| 231 | YfdA | |||
| 673 | DamX protein | |||
| 674 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco12652Dam |
| 675 | ribulose-phosphate 3-epimerase | |||
| 802 | membrane protein | |||
| 803 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.Eco12652ORF803P |
| 804 | DNA-binding protein Fis | |||
| 2135 | phosphohydrolase | |||
| 2136 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco12652DcmP |
| 2137 | V | V.SflFF64DcmP (100% identity) | V.Eco12652DcmP | |
| 2138 | DMT superfamily transporter inner | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4775 | isocitrate dehydrogenase | |||
| 4776 | R | SsoSE61ORF22640P (100% identity) | YCGR | Eco12652ORF4776P |
| 4777 | DNA invertase from prophage CP-933H | |||
| 2969 | isocitrate dehydrogenase | |||
| 2970 | R | SsoSE61ORF22640P (100% identity) | YCGR | Eco12652ORF2970P |
| 2971 | DNA invertase from prophage CP-933H | |||
| 4085 | GTP-binding protein YjiA | |||
| 4086 | R | SenHNK130MrrP (100% identity) | Eco12652MrrP | |
| 4087 | type I restriction enzyme EcoKI subunit R | |||
| 4089 | EcoKI restriction-modification system protein | |||
| ??? | R | SenHNK130McrBP (100% identity) | Eco12652McrBP | |
| 4092 | R | SenHNK130McrCP (100% identity) | Eco12652McrCP | |
| 4093 | DEAD-box helicase-like protein | |||