Escherichia coli NCTC11560 |
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Putative Escherichia coli NCTC11560 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,346,612 bp
GenBank #: UARU00000000 (NZ_UARU00000000)
REBASE acronym: Eco11560
Org_num: 43722
All begin NCTC11560_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1520 | 5-methylcytosine-specific restriction enzyme | |||
| 1522 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.Eco11560I |
| 1523 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.Eco11560I |
| 1524 | R | Msa17ORFC2P (98% identity) | AACNNNNNNGTGC | Eco11560IP |
| 1525 | methylated adenine and cytosine restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 827 | cytoplasmic protein | |||
| 828 | M | M.Xca80ORFEP (100% identity) | M.Eco11560ORF828P | |
| 829 | plasmid segregation protein | |||
| 4606 | Uncharacterised protein | |||
| 4607 | R | EcosS3ORF15775P (98% identity) | Eco11560ORF4608P | |
| 4608 | M | M.EcosS3ORF15775P (100% identity) | M.Eco11560ORF4608P | |
| 4609 | TraG-like protein, N-terminal region | |||
| 2001 | ribulose-phosphate 3-epimerase | |||
| 2002 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco11560Dam |
| 2003 | DamX protein | |||
| 2531 | DNA-binding protein Fis | |||
| 2532 | M | M.Ecos19ORF2295P (100% identity) | ATGCAT | M.Eco11560ORF2532P |
| 2533 | membrane protein | |||
| 2603 | Uncharacterised protein | |||
| 2604 | M | M.EcoVL02ORF18020P (100% identity) | M.Eco11560ORF2604P | |
| 2605 | phage-related membrane protein | |||
| 3994 | DMT superfamily transporter inner | |||
| 3995 | V | V.EcoYP3DcmP (100% identity) | V.Eco11560DcmP | |
| 3996 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Eco11560DcmP |
| 3997 | phosphohydrolase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1519 | R | SenHNK130McrCP (100% identity) | Eco11560McrCP | |
| ??? | R | SenHNK130McrBP (100% identity) | Eco11560McrBP | |
| 1522 | EcoKI restriction-modification system protein | |||
| 1524 | type I restriction enzyme EcoKI subunit R | |||
| 1525 | R | SenHNK130MrrP (100% identity) | Eco11560MrrP | |
| 1526 | GTP-binding protein YjiA | |||