Escherichia coli NCTC11100 |
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Putative Escherichia coli NCTC11100 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,152,852 bp
GenBank #: UFZT00000000 (NZ_UFZT00000000)
REBASE acronym: Eco11100
Org_num: 43689
All begin NCTC11100_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4345 | Uncharacterized conserved protein | |||
| 4346 | R | EcoUTI89IIP (100% identity) | GAGNNNNNNNGTCA | Eco11100IIP |
| 4347 | M | M.EcoUTI89II (97% identity) | GAGNNNNNNNGTCA | M.Eco11100II |
| 4348 | S | S.EcoUTI89II (32% identity) | GAGNNNNNNNGTCA | S1.Eco11100II |
| 4349 | S | S.EcoUTI89II (61% identity) | GAGNNNNNNNGTCA | S2.Eco11100II |
| 4351 | Uncharacterized conserved protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 365 | DamX protein | |||
| 366 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco11100DamP |
| 367 | ribulose-phosphate 3-epimerase | |||
| 488 | membrane protein | |||
| 489 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco11100ORF489P |
| 490 | DNA-binding protein Fis | |||
| 2089 | phosphohydrolase | |||
| ??? | M | M.Eco3783DcmP (99% identity) | CCWGG | M.Eco11100DcmP |
| 2092 | V | V.EcosC25DcmP (100% identity) | V.Eco11100DcmP | |
| 2093 | DMT superfamily transporter inner | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4391 | Uncharacterised protein | |||
| 4392 | M | M.EcoUTI89I (100% identity) | CACAG | M.Eco11100I |
| 4393 | R | EcoUTI89IP (100% identity) | CACAG | Eco11100IP |
| 4394 | phage integrase family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4349 | type I restriction-modification system subunit | |||
| 4351 | R | EcoUTI89GmrSDP (97% identity) | Eco11100GmrDP | |
| 4352 | transposase YhgA-like protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3015 | protein ninx | |||
| 3016 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.Eco11100ORF3016P |
| 3017 | recombination protein ninB from phage origin | |||