Escherichia coli NCTC11022 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli NCTC11022 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,070,399 bp
GenBank #: UGCG00000000 (NZ_UGCG00000000)
REBASE acronym: Eco11022
Org_num: 43688
All begin NCTC11022_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 220 | ybl103 | |||
| 221 | M | M.EcoLSN03ORFAP (100% identity) | YTCANNNNNNGTNG | M.Eco11022I |
| 222 | S | S.Sbo49812I (100% identity) | YTCANNNNNNGTNG | S.Eco11022I |
| 223 | Uncharacterised protein | |||
| 224 | RNase III inhibitor | |||
| 225 | R | Sbo49812IP (99% identity) | YTCANNNNNNGTNG | Eco11022IP |
| 226 | hydrolase | |||
| 4637 | endoribonuclease SymE | |||
| 4639 | S | S.Sen57252ORF19090P (60% identity) | CAAYNNNNNNNATGC | S.Eco11022II |
| 4640 | Type I restriction enzyme EcoAI specificity | |||
| 5022 | Uncharacterised protein | |||
| ??? | M | M.Eco9056ORF4861P (100% identity) | M.Eco11022ORF5023P | |
| 5025 | S | S.Eco62AORF21615P (99% identity) | S.Eco11022ORF5023P | |
| 5026 | Uncharacterised protein | |||
| ??? | R | Eco9056ORF4861P (87% identity) | Eco11022ORF5023P | |
| 5028 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 546 | replication protein for prophage | |||
| 547 | M | M.Eco9085ORF3273P (100% identity) | GATC | M.Eco11022ORF547P |
| 548 | TraR/DksA family transcriptional regulator | |||
| 1859 | DMT superfamily transporter inner | |||
| 1860 | V | V.SsoSE61DcmP (100% identity) | V.Eco11022DcmP | |
| 1861 | M | M.SspS13DcmP (100% identity) | CCWGG | M.Eco11022DcmP |
| 1862 | phosphohydrolase | |||
| 3429 | DNA-binding protein Fis | |||
| 3430 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco11022ORF3430P |
| 3431 | membrane protein | |||
| 3565 | ribulose-phosphate 3-epimerase | |||
| 3566 | M | M.SsoST152DamP (100% identity) | GATC | M.Eco11022DamP |
| 3567 | DamX protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4635 | protein YjiS | |||
| 4636 | R | Efe9LTGmrSDP (99% identity) | Eco11022GmrSDP | |
| 4637 | endoribonuclease SymE | |||