Escherichia coli NCTC10958 |
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Putative Escherichia coli NCTC10958 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,251,583 bp
GenBank #: UGFK00000000 (NZ_UGFK00000000)
REBASE acronym: Eco10958
Org_num: 43683
All begin NCTC10958_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4489 | restriction endonuclease | |||
| 4490 | M | M.Esp9308ORFIP (100% identity) | CGTANNNNNGTC | M.Eco10958II |
| 4491 | S | S.EcoSH3ORF25175P (100% identity) | CGTANNNNNGTC | S.Eco10958II |
| 4492 | R | EcoR31ORF16485P (100% identity) | CGTANNNNNGTC | Eco10958IIP |
| 4494 | Uncharacterized conserved protein | |||
| 4771 | Uncharacterized conserved protein | |||
| 4772 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.Eco10958I |
| 4773 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.Eco10958I |
| 4774 | R | SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | Eco10958IP |
| 4775 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 635 | DNA-binding protein Fis | |||
| 636 | M | M.Ecos671ORFEP (100% identity) | ATGCAT | M.Eco10958ORF636P |
| 637 | membrane protein | |||
| 763 | ribulose-phosphate 3-epimerase | |||
| 764 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco10958DamP |
| 765 | DamX protein | |||
| 2017 | prophage protein | |||
| 2018 | M | M.Eco55989ORF1036P (100% identity) | M.Eco10958ORF2018P | |
| 2019 | prophage protein | |||
| 2032 | lipoprotein | |||
| 2033 | M | M.Eco374ORF14060P (100% identity) | A | M.Eco10958ORF2033P |
| 2037 | anti-adapter protein IraM | |||
| 2149 | phosphohydrolase | |||
| 2150 | M | M.EcoteDDcmP (100% identity) | CCWGG | M.Eco10958ORF2150P |
| 2151 | patch repair protein | |||
| 2150 | DNA-cytosine methyltransferase | |||
| 2151 | V | V.SsoST152DcmP (100% identity) | V.Eco10958DcmP | |
| 2152 | DMT superfamily transporter inner | |||
| 2268 | recombination protein ninB from phage origin | |||
| 2269 | M | M.SflFF36ORF6645P (100% identity) | GATC | M.Eco10958ORF2269P |
| 2270 | protein ninx | |||
| 2275 | lipoprotein | |||
| 2276 | M | M.Ecod58ORF7600P (100% identity) | A | M.Eco10958ORF2276P |
| 2281 | YjhS | |||
| 3024 | phage protein | |||
| 3027 | M | M.Spn7978ORF3515P (100% identity) | A | M.Eco10958ORF3027P |
| 3028 | lipoprotein | |||
| 4594 | transposase, IS903.B | |||
| 4595 | M | M.Sen5773ORF4471P (100% identity) | RCCGGY | M.Eco10958ORF4595P |
| 4596 | histidin kinase-like protein | |||
| 4597 | Uncharacterised protein | |||
| 4598 | R | Ecos19ORF20635P (99% identity) | Eco10958ORF4598P | |
| 4599 | Uncharacterised protein | |||
| 5076 | phage O protein family | |||
| ??? | M | M.Eco10429ORF2692P (97% identity) | M.Eco10958ORF5077P | |
| 5078 | ybl17 | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 920 | Uncharacterised protein | |||
| ??? | R | Kpn0718ORF815P (100% identity) | ACCACC | Eco10958IIIP |
| 923 | M | M.Kpn0718ORF815P (100% identity) | ACCACC | M.Eco10958III |
| 924 | serine protease | |||
| 1993 | transposase, IS903.B | |||
| 1994 | R | Csp16965ORF9430P (86% identity) | Eco10958ORF1995P | |
| 1995 | M | M.Eco9097ORF2097P (99% identity) | M.Eco10958ORF1995P | |
| 1996 | SpnT protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1832 | TraR/DksA family transcriptional regulator | |||
| 1833 | M | M.Sen663ORF16605P (100% identity) | GATC | M.Eco10958ORF1833P |
| 1834 | replication protein for prophage | |||