Escherichia coli NCTC1093 |
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Putative Escherichia coli NCTC1093 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,489,660 bp
GenBank #: UFZI00000000 (NZ_UFZI00000000)
REBASE acronym: Eco1093
Org_num: 43681
All begin NCTC1093_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4566 | Uncharacterized conserved protein | |||
| 4567 | R | EcosLF82ORF3455P (100% identity) | CAAYNNNNNNNNTGAG | Eco1093IP |
| 4568 | M | M.SspS13ORF3945P (100% identity) | CAAYNNNNNNNNTGAG | M.Eco1093I |
| 4569 | S | S.EcoSP5ORF2185P (100% identity) | CAAYNNNNNNNNTGAG | S.Eco1093I |
| 4571 | Uncharacterized conserved protein | |||
| 4609 | Uncharacterised protein | |||
| 4610 | M | M.EcoSP5ORF1945P (100% identity) | GTCANNNNNGTG | M.Eco1093II |
| 4611 | S | S.EcoSP5ORF1945P (100% identity) | GTCANNNNNGTG | S.Eco1093II |
| 4612 | membrane protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5447 | phage protein | |||
| 5453 | M | M.SsoL4094ORF17545P (100% identity) | A | M.Eco1093ORF5453P |
| 5454 | lipoprotein | |||
| 427 | DamX protein | |||
| 428 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco1093DamP |
| 429 | ribulose-phosphate 3-epimerase | |||
| 537 | membrane protein | |||
| 538 | M | M.EspP079ORF3959P (100% identity) | ATGCAT | M.Eco1093ORF538P |
| 539 | DNA-binding protein Fis | |||
| 1262 | IS2 element protein | |||
| ??? | M | M.SflSTLE1ORF5615P (100% identity) | M.Eco1093ORF1263P | |
| 1264 | R | Sso8033ORF3755P (99% identity) | Eco1093ORF1263P | |
| 1265 | 121 aa hypothetical protein | |||
| 2338 | lipoprotein | |||
| 2339 | M | M.SsoL4094ORF17545P (100% identity) | A | M.Eco1093ORF5453P |
| 2345 | phage protein | |||
| 2503 | Uncharacterised protein | |||
| 2504 | M | M.PmeBin330ORFAP (99% identity) | M.Eco1093ORF2504P | |
| 2505 | Uncharacterised protein | |||
| 2590 | prophage protein | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.Eco1093ORF2591P | |
| 2592 | membrane protein | |||
| 3208 | DMT superfamily transporter inner | |||
| 3209 | V | V.SflC32DcmP (74% identity) | V.Eco1093DcmP | |
| 3210 | M | M.EcoIAI39DcmP (100% identity) | CCWGG | M.Eco1093DcmP |
| 3211 | phosphohydrolase | |||
| 4604 | YjhS protein | |||
| 4605 | R | EcosB2CORFAP (100% identity) | Eco1093ORF4605P | |
| 4606 | endonuclease | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4569 | Type I restriction enzyme EcoAI specificity | |||
| 4571 | R | EcoR41GmrSDP (100% identity) | Eco1093GmrSDP | |
| 4572 | transposase YhgA-like protein | |||
| 4605 | restriction endonuclease | |||
| ??? | R | EcoSP46McrBP (100% identity) | Eco1093McrBP | |
| 4608 | R | EcoSP5McrCP (100% identity) | Eco1093McrCP | |
| 4609 | Uncharacterised protein | |||