Escherichia coli NCTC10864 |
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Putative Escherichia coli NCTC10864 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,338,314 bp
GenBank #: UGAR00000000 (NZ_UGAR00000000)
REBASE acronym: Eco10864
Org_num: 43679
All begin NCTC10864_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3337 | methylated adenine and cytosine restriction | |||
| 3338 | R | EfeTORF35550P (99% identity) | Eco10864ORF3339P | |
| 3339 | M | M.EfeC10ORF18400P (99% identity) | M.Eco10864ORF3339P | |
| 3340 | S | S.EcoR23I (42% identity) | S1.Eco10864ORF3339P | |
| 3341 | IS5 transposase and trans-activator | |||
| 3342 | S | S.EcoDI (33% identity) | S2.Eco10864ORF3339P | |
| 3344 | protein YjiS | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 59 | YfdA | |||
| 60 | M | M.SspPIBORF23080P (100% identity) | M.Eco10864ORF10P | |
| 61 | cytoplasmic protein | |||
| 9 | cytoplasmic protein | |||
| ??? | M | M.SspPIBORF23080P (100% identity) | M.Eco10864ORF10P | |
| 12 | YfdA | |||
| 271 | cytoplasmic protein | |||
| 272 | M | M.SenS318ORF60P (100% identity) | M.Eco10864ORF272P | |
| 273 | YfdA | |||
| 2408 | protein ninx | |||
| 2409 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco10864ORF2409P |
| 2410 | recombination protein ninB from phage origin | |||
| 902 | phosphohydrolase | |||
| 903 | M | M.SspS13DcmP (100% identity) | CCWGG | M.Eco10864DcmP |
| 904 | V | V.SsoSE61DcmP (100% identity) | V.Eco10864DcmP | |
| 905 | DMT superfamily transporter inner | |||
| 2972 | hemin importer ATP-binding subunit | |||
| 2973 | M | M.EcoLR03ORF33110P (100% identity) | M.Eco10864ORF2973P | |
| 2974 | antitermination protein from phage origin | |||
| 1819 | phage protein YjhS encoded within prophage | |||
| 1824 | M | M.Spn7978ORF3515P (100% identity) | A | M.Eco10864ORF1824P |
| 1825 | lipoprotein | |||
| 3432 | Uncharacterised protein | |||
| 3433 | M | M.SflFF24DndBP (100% identity) | M.Eco10864DndBP | |
| 3434 | PUA domain (predicted RNA-binding domain) | |||
| 3433 | DNA thiolation protein; phage protein | |||
| 3434 | M | M.SflFF24DndCP (100% identity) | M.Eco10864DndCP | |
| 3435 | ATPase involved in DNA thiolation | |||
| 3434 | PUA domain (predicted RNA-binding domain) | |||
| 3435 | M | M.SflFF24DndDP (100% identity) | M.Eco10864DndDP | |
| 3436 | DNA thiolation protein; phage protein | |||
| 3439 | Uncharacterised protein | |||
| 3440 | R | EcosEC5DptHP (100% identity) | Eco10864DptHP | |
| 3441 | DNA phosphorothioation-dependent restriction | |||
| ??? | R | SflFF24DptGP (99% identity) | Eco10864DptGP | |
| 3443 | DNA phosphorothioation-dependent restriction | |||
| 3442 | Uncharacterised protein | |||
| ??? | R | SflFF24DptFP (99% identity) | Eco10864DptFP | |
| 3445 | heat resistant agglutinin 1 | |||
| 4453 | DamX protein | |||
| 4454 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco10864DamP |
| 4455 | ribulose-phosphate 3-epimerase | |||
| 4584 | membrane protein | |||
| 4585 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.Eco10864ORF4585P |
| 4586 | DNA-binding protein Fis | |||
| 5367 | CPS-53 (KpLE1) prophage protein | |||
| 5368 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco10864ORF5368P |
| 5369 | LexA repressor | |||
| 5410 | Uncharacterised protein | |||
| ??? | M | M.EcoE89ORF17635P (97% identity) | M.Eco10864ORF5411P | |
| 5412 | R | EcoYPE3ORF18250P (100% identity) | Eco10864ORF5411P | |
| 5413 | 121 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3336 | GTP-binding protein YjiA | |||
| 3337 | R | EcoPSJ29MrrP (99% identity) | Eco10864MrrP | |
| 3338 | type I restriction enzyme EcoKI subunit R | |||