Escherichia coli NCTC10766 |
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Putative Escherichia coli NCTC10766 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,544,333 bp
GenBank #: UARX00000000 (NZ_UARX00000000)
REBASE acronym: Eco10766
Org_num: 43675
All begin NCTC10766_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5178 | membrane protein | |||
| 5179 | S | S.EcoSP5ORF1945P (100% identity) | GTCANNNNNGTG | S.Eco10766II |
| 5180 | M | M.EcoSP5ORF1945P (100% identity) | GTCANNNNNGTG | M.Eco10766II |
| 5181 | Uncharacterised protein | |||
| 5227 | Uncharacterized conserved protein | |||
| 5229 | S | S.EcoSP5ORF2185P (100% identity) | CAAYNNNNNNNNTGAG | S.Eco10766I |
| ??? | M | M.SspS13ORF3945P (100% identity) | CAAYNNNNNNNNTGAG | M.Eco10766I |
| 5232 | R | EcosLF82ORF3455P (100% identity) | CAAYNNNNNNNNTGAG | Eco10766IP |
| 5233 | Uncharacterized conserved protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 376 | phage protein | |||
| 382 | M | M.SsoL4094ORF17545P (99% identity) | A | M.Eco10766ORF382P |
| 383 | lipoprotein | |||
| 51 | cytoplasmic protein | |||
| 52 | M | M.Sso866ORF27155P (100% identity) | M.Eco10766ORF52P | |
| 53 | YfdA | |||
| 1610 | TolA protein (fragment) of prophage | |||
| 1613 | M | M.EcoCE10ORF2469P (100% identity) | M.Eco10766ORF1613P | |
| 1614 | outer membrane porin protein NmpC | |||
| 5187 | endonuclease | |||
| 5188 | R | EcosB2CORFAP (100% identity) | Eco10766ORF5188P | |
| 5189 | YjhS protein | |||
| 3706 | prophage protein | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.Eco10766ORF3707P | |
| 3708 | membrane protein | |||
| 1285 | 121 aa hypothetical protein | |||
| 1286 | R | Sso8033ORF3755P (99% identity) | Eco10766ORF1287P | |
| ??? | M | M.SflSTLE1ORF5615P (100% identity) | M.Eco10766ORF1287P | |
| 1288 | Uncharacterised protein | |||
| 3781 | phosphohydrolase | |||
| 3782 | M | M.EcoSP5DcmP (100% identity) | CCWGG | M.Eco10766DcmP |
| 3783 | V | V.SflC32DcmP (74% identity) | V.Eco10766DcmP | |
| 3784 | DMT superfamily transporter inner | |||
| 2390 | DamX protein | |||
| 2391 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco10766Dam |
| 2392 | ribulose-phosphate 3-epimerase | |||
| 2824 | membrane protein | |||
| 2825 | M | M.EspP079ORF3959P (100% identity) | ATGCAT | M.Eco10766ORF2825P |
| 2826 | DNA-binding protein Fis | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5181 | Uncharacterised protein | |||
| 5182 | R | EcoSP5McrCP (87% identity) | Eco10766McrCP | |
| 5183 | IS2 element protein | |||
| 5184 | transposase | |||
| 5185 | restriction system component | |||
| ??? | R | EcoSP46McrBP (100% identity) | Eco10766McrBP | |
| 5188 | restriction endonuclease | |||
| 5225 | transposase YhgA-like protein | |||
| 5226 | R | EcoR41GmrSDP (63% identity) | Eco10766GmrDP | |
| 5227 | R | EcoR41GmrSDP (34% identity) | Eco10766GmrSP | |
| 5229 | Type I restriction enzyme EcoAI specificity | |||