Escherichia coli NCTC10758 |
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Putative Escherichia coli NCTC10758 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,370,627 bp
GenBank #: UGAN00000000 (NZ_UGAN00000000)
REBASE acronym: Eco10758
Org_num: 43673
All begin NCTC10758_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5298 | Uncharacterised protein | |||
| 5299 | M | M.EcoR31ORF22360P (100% identity) | TAAYNNNNNNTTYG | M.Eco10758II |
| 5300 | S | S.EcoR31ORF22360P (100% identity) | TAAYNNNNNNTTYG | S.Eco10758II |
| 5301 | R | EcoR31ORF22360P (100% identity) | TAAYNNNNNNTTYG | Eco10758IIP |
| 5302 | morphogenetic protein | |||
| 737 | Uncharacterised protein | |||
| 738 | M | M.SenSI170ORF3660P (100% identity) | AGGNNNNNRTTG | M.Eco10758I |
| 739 | Uncharacterized protein conserved in bacteria | |||
| 740 | S | S2.SenSI170ORF3660P (100% identity) | AGGNNNNNRTTG | S.Eco10758I |
| 741 | Uncharacterised protein | |||
| 742 | R | SenSI170ORF3660P (100% identity) | AGGNNNNNRTTG | Eco10758IP |
| 743 | transposase | |||
| 2133 | Uncharacterised protein | |||
| 2134 | M | M.EcoSTEC346ORFGP (100% identity) | AGCANNNNNNNTAG | M.Eco10758III |
| 2135 | S | S.EcoTX1999ORF2159P (100% identity) | AGCANNNNNNNTAG | S.Eco10758III |
| ??? | R | Eco83906ORF4824P (99% identity) | AGCANNNNNNNTAG | Eco10758IIIP |
| 2139 | hydrolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4985 | group II intron-encoded reverse transcriptase | |||
| 4987 | M | M.Ecocq9ORF29050P (100% identity) | M.Eco10758ORF4987P | |
| 4988 | cytoplasmic protein | |||
| 5213 | Uncharacterised protein | |||
| ??? | M | M.EcoDEC7EORF292P (83% identity) | M.Eco10758ORF5216P | |
| 5219 | recombination associated protein | |||
| 391 | DamX protein | |||
| 392 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco10758DamP |
| 393 | ribulose-phosphate 3-epimerase | |||
| 520 | membrane protein | |||
| 521 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco10758ORF521P |
| 522 | DNA-binding protein Fis | |||
| 2068 | phosphohydrolase | |||
| 2069 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.Eco10758DcmP |
| 2070 | V | V.SflSTLE3DcmP (100% identity) | V.Eco10758DcmP | |
| 2071 | DMT superfamily transporter inner | |||
| 2993 | phage protein | |||
| 2994 | M | M.Sbo812ORFAP (100% identity) | M.Eco10758ORF2994P | |
| 2995 | ybl17 | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2938 | isocitrate dehydrogenase | |||
| 2939 | R | EcosEC27McrCP (100% identity) | Eco10758McrCP | |
| 2940 | R | EcoteDMcrBP (100% identity) | Eco10758McrBP | |
| 2941 | acyltransferase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1258 | TraR/DksA family transcriptional regulator | |||
| 1259 | M | M.EcoTX1999ORF3129P (100% identity) | M.Eco10758ORF1259P | |
| 1260 | replication protein for prophage | |||