Escherichia coli NCTC10538 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli NCTC10538 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,789,492 bp
GenBank #: UFZS00000000 (NZ_UFZS00000000)
REBASE acronym: Eco10538
Org_num: 43668
All begin NCTC10538_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4384 | methylated adenine and cytosine restriction | |||
| 4385 | R | Msa17ORFC2P (98% identity) | AACNNNNNNGTGC | Eco10538IP |
| 4386 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.Eco10538I |
| 4387 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.Eco10538I |
| 4389 | 5-methylcytosine-specific restriction enzyme | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5162 | cytoplasmic protein | |||
| 5163 | M | M.SflN92ORF24820P (100% identity) | M.Eco10538ORF5163P | |
| 5164 | YfdA | |||
| 380 | DamX protein | |||
| 381 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco10538Dam |
| 382 | ribulose-phosphate 3-epimerase | |||
| 515 | membrane protein | |||
| 516 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.Eco10538ORF516P |
| 517 | DNA-binding protein Fis | |||
| 2033 | phosphohydrolase | |||
| 2034 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco10538DcmP |
| 2035 | V | V.SflFF64DcmP (100% identity) | V.Eco10538DcmP | |
| 2036 | DMT superfamily transporter inner | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2947 | isocitrate dehydrogenase | |||
| ??? | R | SsoSE61ORF22640P (100% identity) | YCGR | Eco10538ORF2948P |
| 2949 | DNA invertase from prophage CP-933H | |||
| 4383 | GTP-binding protein YjiA | |||
| 4384 | R | SenHNK130MrrP (100% identity) | Eco10538MrrP | |
| 4385 | type I restriction enzyme EcoKI subunit R | |||
| 4387 | EcoKI restriction-modification system protein | |||
| ??? | R | SenHNK130McrBP (100% identity) | Eco10538McrBP | |
| 4390 | R | SenHNK130McrCP (100% identity) | Eco10538McrCP | |
| 4391 | DEAD-box helicase-like protein | |||