Escherichia coli NCTC10089 |
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Putative Escherichia coli NCTC10089 RM systems
Ref:
REBASE ref # 22501
GenBank #: CABEEY000000000
REBASE acronym: Eco10089
Org_num: 43661
All begin NCTC10089_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4414 | restriction methylase | |||
| 4415 | M | M.EcoS6995ORFEP (100% identity) | CYYANNNNNNRTGA | M.Eco10089I |
| 4416 | S | S.EcoPEC0009ORF18310P (99% identity) | CYYANNNNNNRTGA | S.Eco10089I |
| 4417 | R | EcoS6995ORFEP (100% identity) | CYYANNNNNNRTGA | Eco10089IP |
| 4418 | Uncharacterised protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5111 | Uncharacterised protein | |||
| 5112 | M | M.EcoR36ORF18275P (98% identity) | M.Eco10089ORF5112P | |
| 5114 | Uncharacterised protein | |||
| 5463 | Uncharacterised protein | |||
| 5464 | M | M.EcoEC361ORF1680P (100% identity) | M.Eco10089ORF5464P | |
| 5465 | Uncharacterised protein | |||
| 5282 | YfdA | |||
| 5283 | M | M.SenBR027ORFEP (100% identity) | SAY | M.Eco10089ORF5283P |
| 5284 | cytoplasmic protein | |||
| 433 | DamX protein | |||
| 434 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco10089DamP |
| 435 | ribulose-phosphate 3-epimerase | |||
| 542 | membrane protein | |||
| 543 | M | M.EcoS6995ORFBP (100% identity) | ATGCAT | M.Eco10089ORF543P |
| 544 | DNA-binding protein Fis | |||
| 1975 | phosphohydrolase | |||
| 1976 | M | M.EcoSC477DcmP (100% identity) | CCWGG | M.Eco10089DcmP |
| 1977 | V | V.EcoSC477DcmP (100% identity) | V.Eco10089DcmP | |
| 1978 | DMT superfamily transporter inner | |||
| 2933 | anti-adapter protein IraM | |||
| 2937 | M | M.EcoS6400ORFGP (100% identity) | M.Eco10089ORF2937P | |
| 2938 | lipoprotein | |||
| 3162 | DNA-binding protein from phage origin | |||
| 3163 | M | M.EcoSC477ORFCP (100% identity) | GATC | M.Eco10089ORF3163P |
| 3164 | protein NinB | |||
| 3240 | transposase of ISEc13 | |||
| 3244 | M | M.Eco14361ORF14730P (99% identity) | A | M.Eco10089ORF3244P |
| 3245 | lipoprotein | |||
| 3248 | prophage protein | |||
| 3249 | R | EcoZ910ORF13770P (100% identity) | GCCGGC | Eco10089ORF3249P |
| ??? | M | M.EcoB1109aORFBP (100% identity) | GCCGGC | M.Eco10089ORF3249P |
| 3251 | prophage protein | |||
| 4320 | phage lysis protein | |||
| 4321 | M | M.Sso63633ORF22290P (100% identity) | M.Eco10089ORF4321P | |
| 4322 | Uncharacterised protein | |||
| 4328 | LexA repressor | |||
| 4329 | M | M.Sso30ORF925P (100% identity) | GATC | M.Eco10089ORF4329P |
| 4330 | CPS-53 (KpLE1) prophage protein | |||
| 4410 | endonuclease | |||
| 4411 | R | EcoE234869ORFAP (100% identity) | Eco10089ORF4411P | |
| 4412 | McrC family protein, McrBC 5-methylcytosine | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4411 | restriction endonuclease | |||
| 4412 | R | EcoS6995McrCP (100% identity) | Eco10089McrCP | |
| 4413 | R | EcoS6995McrBP (100% identity) | Eco10089McrBP | |
| 4414 | restriction methylase | |||