Escherichia coli NCTC10002 |
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Putative Escherichia coli NCTC10002 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,107,437 bp
GenBank #: UGEV00000000 (NZ_UGEV00000000)
REBASE acronym: Eco10002
Org_num: 43657
All begin NCTC10002_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 188 | DNA primase | |||
| 189 | R | EcoDCE7ORF18445P (100% identity) | Eco10002ORF191P | |
| 190 | S | S.EcoDCE7ORF18445P (100% identity) | S.Eco10002ORF191P | |
| 191 | M | M.EcoDCE7ORF18445P (100% identity) | M.Eco10002ORF191P | |
| 192 | restriction methylase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 195 | McrC family protein, McrBC 5-methylcytosine | |||
| 196 | R | EcoC84497ORFJP (96% identity) | Eco10002ORF196P | |
| 197 | endonuclease | |||
| 275 | replication protein from phage | |||
| 276 | M | M.EcocdtDamP (93% identity) | GATC | M.Eco10002ORF276P |
| 277 | LexA repressor | |||
| 1227 | DamX protein | |||
| 1228 | M | M.Eco8621DamP (100% identity) | GATC | M.Eco10002DamP |
| 1229 | ribulose-phosphate 3-epimerase | |||
| 1336 | membrane protein | |||
| 1337 | M | M.EspP079ORF3959P (100% identity) | ATGCAT | M.Eco10002ORF1337P |
| 1338 | DNA-binding protein Fis | |||
| 2112 | Tfp pilus assembly protein, major pilin PilA | |||
| 2113 | M | M.Ecos154ORF1441P (100% identity) | M.Eco10002ORF2113P | |
| 2114 | translation inhibitor protein RaiA | |||
| 2374 | CPS-53 (KpLE1) prophage protein | |||
| 2375 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco10002ORF2375P |
| 2376 | LexA repressor | |||
| 2665 | lipoprotein | |||
| 2666 | M | M.Eco8621ORF1875P (100% identity) | M.Eco10002ORF2666P | |
| 2670 | tellurite resistance protein TciA | |||
| 2963 | phosphohydrolase | |||
| 2964 | M | M.EcoDCE7DcmP (100% identity) | CCWGG | M.Eco10002DcmP |
| 2965 | V | V.EcoSC477DcmP (100% identity) | V.Eco10002DcmP | |
| 2966 | DMT superfamily transporter inner | |||
| 3864 | anti-adapter protein IraM | |||
| 3868 | M | M.EcoS7438ORFNP (100% identity) | M.Eco10002ORF3868P | |
| 3869 | lipoprotein | |||
| 4204 | replication protein for prophage | |||
| 4205 | M | M.Eco941ORF6380P (100% identity) | GATC | M.Eco10002ORF4205P |
| 4206 | TraR/DksA family transcriptional regulator | |||
| 4814 | Flagellar basal-body P-ring formation protein | |||
| ??? | M | M.Eco8621ORF4119P (100% identity) | M.Eco10002ORF4815P | |
| 4816 | R | EcoS7438ORFEP (100% identity) | Eco10002ORF4815P | |
| 4817 | lateral flagellar anti-sigma factor 28 protein | |||
| 5133 | phage lysis protein | |||
| 5134 | M | M.Sso63633ORF22290P (100% identity) | M.Eco10002ORF5134P | |
| 5135 | Uncharacterised protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 193 | Uncharacterised protein | |||
| 194 | R | Eco8621McrBP (100% identity) | Eco10002McrBP | |
| 195 | R | Eco8621McrCP (100% identity) | Eco10002McrCP | |
| 196 | restriction endonuclease | |||