Collinsella aerofaciens NCTC11838 |
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Putative Collinsella aerofaciens NCTC11838 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 2,463,631 bp
GenBank #: UFXC00000000 (NZ_UFXC00000000)
REBASE acronym: Cae11838
Org_num: 43375
All begin NCTC11838_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2227 | Tyrosine recombinase XerC | |||
| 2228 | S | S2.Cae11838ORF1660P (88% identity) | S.Cae11838ORF1660P | |
| 2229 | M | M.Msa17ORFT1P (100% identity) | M.Cae11838ORF1660P | |
| 2230 | R | Msa17ORFT1P (86% identity) | Cae11838ORF1660P | |
| 2231 | Transposase and inactivated derivatives | |||
| 433 | Uncharacterised protein | |||
| 434 | S | S1.Bbi29521ORF616P (75% identity) | S3.Cae11838ORF439P | |
| 435 | R | Msa17ORFG2P (100% identity) | Cae11838ORF439P | |
| 436 | S | S1.Msa17ORFG2P (91% identity) | S2.Cae11838ORF439P | |
| 437 | Tyrosine recombinase XerC | |||
| 438 | S | S2.Msa17ORFG2P (81% identity) | S1.Cae11838ORF439P | |
| 439 | M | M.Msa17ORFG2P (100% identity) | M.Cae11838ORF439P | |
| 440 | Uncharacterised protein | |||
| 1654 | Uncharacterized conserved protein | |||
| 1655 | S | S.Caewa7ORFAP (99% identity) | S2.Cae11838ORF1660P | |
| 1656 | Tyrosine recombinase XerC | |||
| 1657 | Transposase and inactivated derivatives | |||
| 1658 | DNA replication protein dnaC | |||
| 1659 | S | S.Msa17ORFT1P (100% identity) | S1.Cae11838ORF1660P | |
| 1660 | M | M.Msa17ORFT1P (100% identity) | M.Cae11838ORF1660P | |
| 1661 | R | Msa17ORFT1P (86% identity) | Cae11838ORF1660BP | |
| 1662 | Transposase and inactivated derivatives | |||
| 1663 | transposase/IS protein | |||
| 1664 | Transposase and inactivated derivatives | |||
| 1665 | Transposase and inactivated derivatives | |||
| 1666 | R | Caewa7ORFBP (40% identity) | Cae11838ORF1660AP | |
| 1667 | sporulation inhibitor KapD | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 184 | Uncharacterized protein conserved in bacteria | |||
| 186 | RM | Msa17ORFFP (100% identity) | Cae11838ORF186P | |
| 187 | Uncharacterized conserved protein | |||
| 1460 | PglZ domain | |||
| 1461 | RM | CaeORF1524BP (100% identity) | Cae11838ORF1461BP | |
| 1462 | Uncharacterised protein | |||
| 1463 | RM | CaeORF1524AP (100% identity) | Cae11838ORF1461AP | |
| 1464 | Uncharacterised protein | |||