Clostridium sporogenes NCTC275 |
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Putative Clostridium sporogenes NCTC275 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,242,363 bp
GenBank #: UFWW00000000 (NZ_UFWW00000000)
REBASE acronym: Csp275
Org_num: 42985
All begin NCTC275_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2307 | threonine synthase | |||
| 2308 | R | CspS1532ORF11175P (100% identity) | AGTNNNNNNRTGC | Csp275IP |
| 2309 | S | S.CspS1532ORF11175P (100% identity) | AGTNNNNNNRTGC | S.Csp275I |
| 2310 | M | M.CspS1531ORF6775P (100% identity) | AGTNNNNNNRTGC | M.Csp275I |
| 2311 | ABC transporter | |||
| 3404 | Protein of uncharacterised function(DUF2089) | |||
| 3405 | R | Cbo05ORFBP (98% identity) | ACANNNNNNCTTG | Csp275IIP |
| 3406 | Uncharacterised protein | |||
| 3407 | S | S.CboF160III (63% identity) | ACANNNNNNCTTG | S.Csp275II |
| 3408 | M | M.CboB742I (97% identity) | ACANNNNNNCTTG | M.Csp275II |
| 3409 | cell wall-binding protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 757 | polysaccharide deacetylase family protein | |||
| 758 | M | M.CspS1532ORF3960P (100% identity) | CAAAAAR | M.Csp275III |
| 759 | spermidine synthase | |||
| 1868 | tetracycline resistance protein TetP | |||
| 1869 | R | Cbocb1DptFP (99% identity) | Csp275DptFP | |
| 1870 | DNA phosphorothioation-dependent restriction | |||
| 1869 | transmembrane anchored protein | |||
| 1870 | R | Cbocb5DptGP (99% identity) | Csp275DptGP | |
| 1871 | transmembrane anchored protein | |||
| 1870 | DNA phosphorothioation-dependent restriction | |||
| 1871 | R | Cbocb5DptHP (99% identity) | Csp275DptHP | |
| 1872 | Uncharacterized conserved protein | |||
| 1872 | Uncharacterized conserved protein | |||
| 1873 | M | M.Cbocb5DndAP (99% identity) | M.Csp275DndAP | |
| 1874 | DNA sulfur modification protein DndE | |||
| 1873 | cysteine desulfurase | |||
| 1874 | M | M.Cbocb5DndEP (100% identity) | M.Csp275DndEP | |
| 1875 | DNA sulfur modification protein DndD | |||
| 1874 | DNA sulfur modification protein DndE | |||
| 1875 | M | M.Cbocb5DndDP (100% identity) | M.Csp275DndDP | |
| 1876 | sulfurtransferase DndC | |||
| 1875 | DNA sulfur modification protein DndD | |||
| 1876 | M | M.Cbocb5DndCP (99% identity) | M.Csp275DndCP | |
| 1877 | DNA sulfur modification protein DndB | |||
| 1876 | sulfurtransferase DndC | |||
| 1877 | M | M.Cbocb5DndBP (100% identity) | M.Csp275DndBP | |
| 1878 | Protein of uncharacterised function | |||
| 2755 | N-acetylmuramoyl-L-alanine amidase | |||
| 2756 | M | M.CspS1531ORF4400P (100% identity) | GATAAT | M.Csp275IV |
| 2757 | 3-methyladenine DNA glycosylase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3430 | transcriptional antiterminator, LicT | |||
| 3431 | R | Cbo1632IIIP (93% identity) | Csp275ORF3432P | |
| ??? | M | M.DfeGSS09ORF11850P (63% identity) | M.Csp275ORF3432P | |
| 3434 | Uncharacterised protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3442 | mutator mutT protein | |||
| ??? | R | CboA634ORF4935P (95% identity) | Csp275ORF3443P | |
| 3444 | DNA repair helicase Rad25 | |||