Clostridium perfringens NCTC8798 |
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Putative Clostridium perfringens NCTC8798 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 3,084,171 bp
GenBank #: UAWF00000000 (NZ_UAWF00000000)
REBASE acronym: Cpe8798
Org_num: 42981
All begin NCTC8798_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 343 | Reverse transcriptase (RNA-dependent DNA | |||
| 344 | R | CpeHS3ORF4520P (100% identity) | GAGNNNNNNRCT | Cpe8798IP |
| 345 | M | M.CpeHS7ORF4560P (100% identity) | GAGNNNNNNRCT | M.Cpe8798I |
| 346 | S | S.CpeC645ORF4645P (100% identity) | GAGNNNNNNRCT | S.Cpe8798I |
| 347 | Uncharacterised protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2884 | phage-like protein | |||
| 2885 | M | M.CpeSORF51P (100% identity) | M.Cpe8798ORF2885P | |
| 2886 | glycosyl hydrolase | |||
| 2176 | phage infection protein | |||
| 2177 | M | M.CpeSORF2592P (100% identity) | GTATAC | M.Cpe8798II |
| 2178 | methionine sulfoxide reductase A | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 337 | NAD-dependent deacetylase | |||
| 338 | R | Cpe9851ORF915P (100% identity) | Cpe8798ORF338P | |
| 339 | integrase catalytic subunit | |||