Clostridium perfringens NCTC8679 |
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Putative Clostridium perfringens NCTC8679 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 3,056,510 bp
GenBank #: UFXM00000000 (NZ_UFXM00000000)
REBASE acronym: Cpe8679
Org_num: 42979
All begin NCTC8679_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 921 | competence protein-like protein | |||
| 922 | M | M.Cpe2085ORF4325P (100% identity) | CCYANNNNNNNTAG | M.Cpe8679I |
| 923 | S | S1.Cpe2085ORF4325P (100% identity) | S1.Cpe8679IP | |
| 924 | S | S2.Cpe2085ORF4325P (100% identity) | CCYANNNNNNNTAG | S2.Cpe8679I |
| 925 | Site-specific recombinase XerD | |||
| 926 | S | S3.Cpe2085ORF4325P (53% identity) | S4.Cpe8679IP | |
| 927 | type I restriction-modification system subunit | |||
| 928 | Uncharacterised protein | |||
| 929 | Uncharacterised protein | |||
| 930 | R | Cpe2085ORF4325P (100% identity) | CCYANNNNNNNTAG | Cpe8679IP |
| 931 | HNH endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2778 | methionine sulfoxide reductase A | |||
| 2779 | M | M.Cpe2085ORF13105P (100% identity) | GTATAC | M.Cpe8679II |
| 2780 | phage infection protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 171 | DNA/RNA helicase | |||
| 172 | M | M.Cpe2085ORF745P (100% identity) | AACCC | M.Cpe8679III |
| 173 | R | Cpe2085ORF745P (100% identity) | AACCC | Cpe8679IIIP |
| 174 | nuclease-like protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 917 | Uncharacterised protein | |||
| 918 | R | Cpe2085ORF4305P (100% identity) | Cpe8679ORF918P | |
| 919 | Uncharacterised protein | |||