Clostridium perfringens NCTC8359 |
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Putative Clostridium perfringens NCTC8359 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 3,097,952 bp
GenBank #: UAVZ00000000 (NZ_UAVZ00000000)
REBASE acronym: Cpe8359
Org_num: 42975
All begin NCTC8359_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2948 | R | Cpe8359ORF1167P (14% identity) | Cpe8359ORF2949P | |
| ??? | M | M.CpeA17ORF5335P (72% identity) | M.Cpe8359ORF2949P | |
| 2952 | S | S.CpeHS3ORF4520P (70% identity) | S1.Cpe8359ORF2949P | |
| 2953 | S | S.Cpe8359ORF1167P (19% identity) | S2.Cpe8359ORF2949P | |
| 2954 | DEAD/DEAH box helicase domain-containing | |||
| 363 | Uncharacterised protein | |||
| 364 | M | M.CpeC746ORF11820P (100% identity) | AGGNNNNNCTAR | M.Cpe8359I |
| 365 | S | S.CpeC746ORF11820P (100% identity) | AGGNNNNNCTAR | S.Cpe8359I |
| 366 | Uncharacterised protein | |||
| 367 | R | CpeC746ORF11820P (100% identity) | AGGNNNNNCTAR | Cpe8359IP |
| 368 | metal-dependent hydrolase | |||
| 1165 | Reverse transcriptase (RNA-dependent DNA | |||
| 1166 | R | CpeC645ORF4645P (99% identity) | ACCNNNNNNTGC | Cpe8359IIP |
| 1167 | M | M.CpeA17ORF5335P (100% identity) | ACCNNNNNNTGC | M.Cpe8359II |
| 1168 | S | S.CpeHS3ORF4520P (100% identity) | ACCNNNNNNTGC | S.Cpe8359II |
| 1169 | DEAD/DEAH box helicase domain-containing | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2741 | methionine sulfoxide reductase A | |||
| 2742 | M | M.CpeSORF2592P (100% identity) | GTATAC | M.Cpe8359III |
| 2743 | phage infection protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1159 | Uncharacterised protein | |||
| 1160 | R | CpeC793ORF4335P (99% identity) | Cpe8359ORF1160P | |
| 1161 | integrase catalytic subunit | |||