Clostridioides difficile NCTC13746 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Clostridioides difficile NCTC13746 RM systems
Ref:
REBASE ref # 22501
GenBank #: CABEGL000000000
REBASE acronym: Cdi13746
Org_num: 42955
All begin NCTC13746_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3368 | Uncharacterized conserved protein | |||
| 3369 | R | CdiS0253ORF15190P (100% identity) | GAANNNNNNCTG | Cdi13746IP |
| 3370 | Uncharacterised protein | |||
| 3371 | DNA polymerase subunit beta | |||
| 3372 | S | S.Cdo002III (100% identity) | GAANNNNNNCTG | S.Cdi13746I |
| 3373 | M | M.PdiZ31ORF1268P (100% identity) | GAANNNNNNCTG | M.Cdi13746I |
| 3374 | tagatose-bisphosphate aldolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | RM | Cdi107IV (78% identity) | RGAAAGR | Cdi13746V |
| 70 | Uncharacterised protein | |||
| 42 | Uncharacterised protein | |||
| 43 | M | M.Cdo002ORFAP (100% identity) | M.Cdi13746ORF43P | |
| 44 | n-acetylmuramoyl-l-alanine amidase | |||
| 570 | Uncharacterised protein | |||
| 571 | M | M.Cdo002ORFBP (94% identity) | M.Cdi13746ORF571P | |
| 572 | Uncharacterised protein | |||
| 815 | conjugative transposon replication initiation | |||
| 816 | C | C.PdiZ31ORF415P (100% identity) | C.Cdi13746IVP | |
| 817 | RM | Cdo002IV (100% identity) | GCMGAAG | Cdi13746IV |
| 818 | Uncharacterised protein | |||
| 3115 | phospholipase | |||
| 3116 | M | M.PdiZ31ORF1541P (100% identity) | CAAAAA | M.Cdi13746II |
| 3117 | transcriptional regulator | |||
| 3454 | peptidase C14 caspase catalytic subunit p20 | |||
| 3455 | M | M.Cdo002V (100% identity) | GGNCC | M.Cdi13746ORF3455P |
| 3456 | R | CdiS0253ORF15585P (100% identity) | GGNCC | Cdi13746ORF3455P |
| 3457 | Uncharacterised protein | |||
| 3466 | Uncharacterised protein | |||
| 3467 | M | M.Cdo002II (100% identity) | GATC | M.Cdi13746III |
| 3468 | 115 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2405 | sigma-54-dependent transcriptional regulator | |||
| 2406 | R | Cdo002McrCP (100% identity) | Cdi13746McrCP | |
| 2407 | R | Pdi6602McrBP (100% identity) | Cdi13746McrBP | |
| 2408 | cell division protein FtsZ | |||