Citrobacter koseri NCTC10770 |
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Putative Citrobacter koseri NCTC10770 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,994,466 bp
GenBank #: UFWC00000000 (NZ_UFWC00000000)
REBASE acronym: Cko10770
Org_num: 42946
All begin NCTC10770_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3969 | Uncharacterised protein | |||
| 3970 | R | CkoK820ORF21895P (100% identity) | CGANNNNNNNNRTGAC | Cko10770IP |
| 3971 | M | M.CkoK820ORF21895P (100% identity) | CGANNNNNNNNRTGAC | M.Cko10770I |
| 3972 | S | S.CkoK820ORF21895P (100% identity) | CGANNNNNNNNRTGAC | S.Cko10770I |
| 3974 | Protein of uncharacterised function (DUF2955) | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4889 | Uncharacterised protein | |||
| 4890 | M | M.Cko0ORF1699P (91% identity) | M.Cko10770ORF4890P | |
| 4891 | Uncharacterised protein | |||
| 4733 | Uncharacterised protein | |||
| 4734 | M | M.CspC17ORF22640P (97% identity) | M.Cko10770ORF4734P | |
| 4735 | Uncharacterised protein | |||
| 4806 | type IV pilus biogenesis protein | |||
| 4807 | M | M.CfrNIH2ORF3200P (74% identity) | M.Cko10770ORF4807P | |
| 4808 | T2SS protein E | |||
| 330 | DamX protein | |||
| 331 | M | M.Csp5362DamP (100% identity) | GATC | M.Cko10770DamP |
| 332 | ribulose-phosphate 3-epimerase | |||
| 448 | Protein of uncharacterised function (DUF2556) | |||
| 449 | M | M.CkoK616ORF2200P (100% identity) | ATGCAT | M.Cko10770ORF449P |
| 450 | DNA-binding protein Fis | |||
| 1319 | Uncharacterised protein | |||
| ??? | M | M.EcoCX21ORF14270P (94% identity) | M.Cko10770ORF1320P | |
| 1321 | Uncharacterised protein | |||
| 1336 | Uncharacterised protein | |||
| 1337 | M | M.Cko10769ORF1389P (98% identity) | M.Cko10770ORF1337P | |
| 1338 | Uncharacterised protein | |||
| 1415 | Uncharacterised protein | |||
| 1416 | M | M.CkoK1818ORF7190P (98% identity) | M.Cko10770ORF1416P | |
| 1417 | Phage antitermination protein Q | |||
| 1573 | transcriptional regulator NarP | |||
| 1574 | M | M.CkoK616ORF7160P (100% identity) | M.Cko10770ORF1574P | |
| 1575 | Predicted ATP-binding protein involved in | |||
| 1848 | phosphohydrolase | |||
| ??? | M | M.Kpn5055ORF1936P (100% identity) | M.Cko10770ORF1849P | |
| 1850 | V | V.Kpn5055ORF1936P (100% identity) | V.Cko10770ORF1849P | |
| 1851 | amino acid metabolite efflux | |||
| 4023 | Uncharacterised protein | |||
| 4024 | R | RorA14ORF2075P (99% identity) | ACTGGG | Cko10770IIP |
| 4025 | M | M2.EcoSP65ORF3660P (99% identity) | ACTGGG | M1.Cko10770II |
| 4026 | M | M1.RorA14ORF2075P (35% identity) | ACTGGG | M2.Cko10770II |
| 4027 | integrase | |||
| 4323 | Protein of uncharacterised function (DUF968) | |||
| 4324 | M | M.Cko10811ORF4659P (97% identity) | M.Cko10770ORF4324P | |
| 4325 | Conserved phage C-terminus (Phg_2220_C) | |||
| 4336 | PUA domain (predicted RNA-binding domain) | |||
| 4337 | M | M.Cko0ORF1699P (91% identity) | M.Cko10770ORF4890P | |
| 4338 | Uncharacterised protein | |||