Citrobacter freundii NCTC8782 |
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Putative Citrobacter freundii NCTC8782 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,949,910 bp
GenBank #: UIGT00000000 (NZ_UIGT00000000)
REBASE acronym: Cfr8782
Org_num: 42943
All begin NCTC8782_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1060 | Uncharacterized conserved protein | |||
| 1061 | M | M.CspCF971ORF5910P (100% identity) | GAGNNNNNNRTTT | M.Cfr8782I |
| 1062 | S | S.Cpo1222ORF23450P (100% identity) | GAGNNNNNNRTTT | S.Cfr8782I |
| 1063 | R | CspCF971ORF5910P (100% identity) | GAGNNNNNNRTTT | Cfr8782IP |
| 1064 | Uncharacterised protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4744 | Uncharacterised protein | |||
| 4745 | M | M.Sen3039ORF24445P (100% identity) | M.Cfr8782ORF4745P | |
| 4746 | DNA polymerase III subunit beta | |||
| 860 | Protein of uncharacterised function (DUF1493) | |||
| 861 | R | Cyo13708ORF4243P (98% identity) | Cfr8782ORF861P | |
| 862 | Uncharacterized protein conserved in bacteria | |||
| 869 | Fic/DOC family | |||
| 870 | R | Sen0345ORF8810P (98% identity) | Cfr8782ORF871P | |
| ??? | M | M.Sen20761ORF19740P (99% identity) | M.Cfr8782ORF871P | |
| 872 | Uncharacterised protein | |||
| 871 | DNA cytosine methylase | |||
| 872 | R | Cfr3863ORF20570P (98% identity) | Cfr8782ORF873P | |
| 873 | M | M.Cfr3863ORF20570P (99% identity) | M.Cfr8782ORF873P | |
| 874 | integrase | |||
| 1866 | DamX protein | |||
| 1867 | M | M.CyoCF10DamP (100% identity) | GATC | M.Cfr8782DamP |
| 1868 | ribulose-phosphate 3-epimerase | |||
| 1965 | Protein of uncharacterised function (DUF2556) | |||
| 1966 | M | M.Cyo13709ORF446P (99% identity) | ATGCAT | M.Cfr8782ORF1966P |
| 1967 | DNA-binding protein Fis | |||
| 3249 | Uncharacterised protein | |||
| 3250 | V | V.CyoCF10ORF9480P (100% identity) | V.Cfr8782ORF3251P | |
| ??? | M | M.Cyo13709ORF1821P (99% identity) | CCWGG | M.Cfr8782ORF3251P |
| 3252 | phosphohydrolase | |||
| 3378 | Conserved phage C-terminus (Phg_2220_C) | |||
| 3379 | M | M1.Cfr302ORF10410P (97% identity) | M.Cfr8782ORF3379P | |
| 3380 | prophage DNA cytosine methylase | |||
| 3379 | prophage DNA adenine methylase | |||
| 3380 | M | M2.Cfr120ORF6470P (91% identity) | M.Cfr8782ORF3380P | |
| 3381 | Crossover junction endodeoxyribonuclease rusA | |||
| 3622 | Uncharacterised protein | |||
| 3623 | M | M.Cyo13709ORF2217P (95% identity) | M.Cfr8782ORF3623P | |
| 3624 | Uncharacterised protein | |||
| 3636 | phage antiterminator protein | |||
| 3637 | M | M.CbrLBA3ORF7325P (92% identity) | M.Cfr8782ORF3637P | |
| 3638 | Uncharacterised protein | |||
| 4319 | Uncharacterised protein | |||
| 4320 | M | M.Cfr1ORF10335P (91% identity) | M1.Cfr8782ORF4320P | |
| 4321 | M | M2.Cfr181ORF3885P (87% identity) | M2.Cfr8782ORF4320P | |
| 4322 | Uncharacterised protein | |||