Citrobacter freundii NCTC13639 |
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Putative Citrobacter freundii NCTC13639 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,659,989 bp
GenBank #: UAVQ00000000 (NZ_UAVQ00000000)
REBASE acronym: Cfr13639
Org_num: 42939
All begin NCTC13639_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 949 | Protein of unknwon function (DUF2893) | |||
| 950 | R | CfrSK3ORF3795P (100% identity) | TTACNNNNNTAYC | Cfr13639IP |
| 951 | M | M.Cfr1443ORF5620P (100% identity) | TTACNNNNNTAYC | M.Cfr13639I |
| 952 | S | S.CfrSK3ORF3795P (100% identity) | TTACNNNNNTAYC | S.Cfr13639I |
| 955 | Uncharacterised protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6047 | Uncharacterised protein | |||
| 6048 | M | M.Sen74091ORF23005P (100% identity) | M.Cfr13639ORF6048P | |
| 6049 | Uncharacterised ACR, COG2135 | |||
| 5912 | methylase | |||
| 5913 | M | M.Csp424ORF23825P (88% identity) | M.Cfr13639ORF5913P | |
| 5914 | Uncharacterised protein | |||
| 5811 | recombination associated protein | |||
| 5812 | M | M.CpoC01ORF25370P (100% identity) | M.Cfr13639ORF5812P | |
| 5813 | Uncharacterised protein | |||
| 440 | DamX protein | |||
| 441 | M | M.Eco5172DamP (100% identity) | GATC | M.Cfr13639DamP |
| 442 | ribulose-phosphate 3-epimerase | |||
| 558 | Protein of uncharacterised function (DUF2556) | |||
| 559 | M | M.CfrSK3ORF2280P (100% identity) | ATGCAT | M.Cfr13639II |
| 560 | DNA-binding protein Fis | |||
| 1446 | Conserved phage C-terminus (Phg_2220_C) | |||
| 1447 | M | M2.Cpo64ACORF1855P (99% identity) | M.Cfr13639ORF1447P | |
| 1448 | prophage DNA cytosine methylase | |||
| 1447 | prophage DNA adenine methylase | |||
| 1448 | M | M2.Cfr77772ORF15095P (99% identity) | M.Cfr13639ORF1448P | |
| 1449 | Crossover junction endodeoxyribonuclease rusA | |||
| 1453 | Predicted P-loop ATPase | |||
| 1454 | M | M.CfrC04ORF5930P (97% identity) | M.Cfr13639ORF1454P | |
| 1455 | Uncharacterised protein | |||
| 2281 | phosphohydrolase | |||
| ??? | M | M.CspMGH103ORFHP (100% identity) | CCWGG | M.Cfr13639ORF2282P |
| 2283 | V | V.CspS39ORF13780P (100% identity) | V.Cfr13639ORF2282P | |
| 2284 | amino acid metabolite efflux | |||
| 2341 | Uncharacterised protein | |||
| 2342 | M | M.Cfr4128ORF9930P (100% identity) | M.Cfr13639ORF2342P | |
| 2343 | Uncharacterised protein | |||
| 2450 | Uncharacterised protein | |||
| 2451 | M | M.CpoC01ORF16465P (96% identity) | M.Cfr13639ORF2451P | |
| 2452 | Uncharacterised protein | |||
| 2800 | Bacterial protein of uncharacterised function | |||
| 2801 | M | M.Cfr112ORF2470P (100% identity) | M.Cfr13639ORF2801P | |
| 2802 | Uncharacterised protein | |||
| 3395 | RNA polymerase sigma factor, sigma-70 family | |||
| 3396 | M | M.CfrSK3ORF14860P (100% identity) | M.Cfr13639ORF3396P | |
| 3397 | Uncharacterised protein | |||
| 4969 | Predicted restriction endonuclease | |||
| 4970 | R | Cfr112ORF4185P (100% identity) | Cfr13639ORF4970P | |
| 4971 | site-specific tyrosine recombinase XerD | |||
| 5304 | Uncharacterised protein | |||
| 5305 | M | M.CfrA47ORF23120P (99% identity) | M.Cfr13639ORF5305P | |
| 5306 | Uncharacterised protein | |||
| 5309 | Crossover junction endodeoxyribonuclease rusA | |||
| 5310 | M | M.Cpo2861ORF9635P (99% identity) | M.Cfr13639ORF5310P | |
| 5311 | Conserved phage C-terminus (Phg_2220_C) | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 776 | Protein of uncharacterised function (DUF3296) | |||
| 777 | M | M.Eco9067ORF712P (99% identity) | M.Cfr13639ORF777P | |
| 778 | Uncharacterised protein | |||
| 826 | Uncharacterised protein | |||
| 827 | R | KspBL02ORF12010P (99% identity) | GCGCAG | Cfr13639IIIP |
| ??? | M | M.Cfr1443ORF5065P (64% identity) | GCGCAG | M.Cfr13639III |
| 830 | Uncharacterized protein conserved in bacteria | |||
| 3572 | Uncharacterised protein | |||
| ??? | M | M.Cfr354ORF32890P (98% identity) | GTCAGC | M.Cfr13639IV |
| 3576 | R | Eco0093ORF8970P (97% identity) | GTCAGC | Cfr13639IVP |
| 3577 | Bacterial shufflon protein, N-terminal constant | |||