Chryseobacterium indologenes NCTC10796 |
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Putative Chryseobacterium indologenes NCTC10796 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,929,686 bp
GenBank #: UIGS00000000 (NZ_UIGS00000000)
REBASE acronym: Cin10796
Org_num: 42932
All begin NCTC10796_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2 | Transposase and inactivated derivatives | |||
| 3 | S | S4.EanNUHP1ORF1615P (31% identity) | S.Cin10796ORF3P | |
| 4 | Integrase | |||
| ??? | R | Cin337IP (85% identity) | Cin10796ORF3P | |
| 9 | Uncharacterised protein | |||
| 3628 | Por secretion system C-terminal sorting domain | |||
| 3629 | R | Cin337IP (100% identity) | CAGNNNNNNTGA | Cin10796IP |
| 3630 | Integrase | |||
| 3631 | S | S4.Cin16777ORF10705P (97% identity) | CAGNNNNNNTGA | S4.Cin10796I |
| 3632 | S | S3.Cin16777ORF10705P (100% identity) | CAGNNNNNNTGA | S3.Cin10796I |
| ??? | S | S2.Cin16777ORF10705P (100% identity) | CAGNNNNNNTGA | S2.Cin10796I |
| 3633 | transposase | |||
| 3634 | Transposase and inactivated derivatives | |||
| 3635 | S | S1.Cin16777ORF10705P (95% identity) | CAGNNNNNNTGA | S1.Cin10796I |
| 3636 | M | M.Cin337I (100% identity) | CAGNNNNNNTGA | M.Cin10796I |
| 3637 | RteC protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1468 | Type IV secretory pathway, VirB4 components | |||
| 1469 | C | C.Cin16777ORF22710P (100% identity) | C.Cin10796IIP | |
| 1470 | M | M1.Cin16777ORF22710P (100% identity) | GACGC | M1.Cin10796IIP |
| 1471 | R | Cgl11432IIP (100% identity) | GACGC | Cin10796IIP |
| 1472 | M | M2.Cin16777ORF22710P (100% identity) | GACGC | M2.Cin10796II |
| 1473 | Uncharacterised protein | |||
| 1607 | Type IV secretory pathway, VirB4 components | |||
| 1608 | M | M.Cla197ORF13670P (100% identity) | M.Cin10796ORF1608P | |
| 1609 | Uncharacterised protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4439 | ATP-independent RNA helicase dbpA | |||
| 4440 | M | M.Cin16777ORF14725P (100% identity) | M.Cin10796ORF4440P | |
| 4441 | R | Cin16777ORF14725P (100% identity) | Cin10796ORF4440P | |
| 4442 | 70 kDa antigen | |||