Cardiobacterium valvarum NCTC13294 |
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Putative Cardiobacterium valvarum NCTC13294 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 2,755,518 bp
GenBank #: UFUW00000000 (NZ_UFUW00000000)
REBASE acronym: Cva13294
Org_num: 42925
All begin NCTC13294_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1473 | Phosphoribosylformylglycinamidine cyclo-ligase | |||
| 1474 | R | Cho807ORF325P (91% identity) | CGANNNNNNNNTAYC | Cva13294IP |
| 1475 | Transposase and inactivated derivatives | |||
| 1476 | S | S1.Nmu19696ORF2500P (36% identity) | CGANNNNNNNNTAYC | S.Cva13294I |
| 1477 | Virulence protein | |||
| 1478 | M | M.Eco10596ORF1725P (83% identity) | CGANNNNNNNNTAYC | M.Cva13294I |
| 1479 | Uncharacterised protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 855 | Uncharacterized conserved protein | |||
| 856 | M | M.Nbr17716ORF5645P (69% identity) | M.Cva13294ORF856P | |
| 857 | O-acetyl-ADP-ribose deacetylase | |||
| 1329 | Uncharacterised protein | |||
| 1330 | M | M.Nwe28987ORFEP (56% identity) | M.Cva13294ORF1330P | |
| 1331 | Uncharacterised protein | |||
| 2381 | Uncharacterised protein | |||
| 2382 | M | M1.Sin10717ORF776P (69% identity) | M1.Cva13294ORF2382P | |
| ??? | M | M2.Sin10717ORF776P (64% identity) | M2.Cva13294ORF2382P | |
| 2384 | Excinuclease ABC subunit B | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 228 | Uncharacterised protein | |||
| 229 | M | M.Bta16309ORF1000P (64% identity) | M.Cva13294ORF229P | |
| 230 | R | Nwe15191ORFBP (65% identity) | Cva13294ORF229P | |
| 231 | ATP-dependent DNA helicase recG | |||
| 1160 | RNA polymerase-associated protein rapA | |||
| 1161 | R | Aav11297ORF560P (54% identity) | Cva13294ORF1163P | |
| 1162 | Transposase and inactivated derivatives | |||
| ??? | M | M.Sor49457ORFBP (25% identity) | M.Cva13294ORF1163P | |
| 1165 | Uncharacterised protein | |||
| 2510 | Uncharacterised protein | |||
| 2511 | M | M.CspQ4385ORFCP (98% identity) | M.Cva13294ORF2511P | |
| 2512 | Cysteine--tRNA ligase | |||