Capnocytophaga granulosa NCTC12948 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Capnocytophaga granulosa NCTC12948 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 2,843,797 bp
GenBank #: UFVE00000000 (NZ_UFVE00000000)
REBASE acronym: Cgr12948
Org_num: 42922
All begin NCTC12948_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 261 | Predicted membrane protein | |||
| 263 | R | BfrBFG14ORF9365P (65% identity) | Cgr12948ORF264P | |
| ??? | M | M.CinSt51ORF14330P (57% identity) | M.Cgr12948ORF264P | |
| 266 | S | S2.Bth7330ORF3563P (13% identity) | S1.Cgr12948ORF264P | |
| 267 | S | S2.Bfa513ORF9990P (44% identity) | S2.Cgr12948ORF264P | |
| 268 | Tyrosine recombinase XerC | |||
| 269 | S | S.Eme10586II (31% identity) | S3.Cgr12948ORF264P | |
| 270 | Outer membrane cobalamin receptor protein | |||
| 472 | Protein of uncharacterised function DUF45 | |||
| 473 | R | CspKC1668ORF8975P (88% identity) | CAGNNNNNRTAY | Cgr12948IP |
| 474 | Uncharacterised protein | |||
| 475 | S | S.AbuAB17ORFFP (36% identity) | CAGNNNNNRTAY | S.Cgr12948I |
| 476 | Protein involved in cell division | |||
| 477 | M | M.CspKC1668ORF8975P (93% identity) | CAGNNNNNRTAY | M.Cgr12948I |
| 478 | EcoKI restriction-modification system protein | |||
| 540 | FtsX-like permease family | |||
| 541 | R | CgiH1496ORF6185P (92% identity) | TAAGNNNNNNRTTA | Cgr12948IIP |
| 542 | M | M.CgiH1496ORF6185P (98% identity) | TAAGNNNNNNRTTA | M.Cgr12948II |
| 543 | Virulence protein | |||
| 544 | Virulence protein | |||
| 545 | S | S2.Bfr536ORF15220P (64% identity) | TAAGNNNNNNRTTA | S.Cgr12948II |
| 546 | Tyrosine recombinase XerC | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 380 | Uncharacterised protein | |||
| 381 | RM | CspOS43ORF15540P (88% identity) | Cgr12948ORF381P | |
| 382 | Uncharacterised protein | |||
| 898 | NADP-dependent 3-hydroxy acid dehydrogenase | |||
| 899 | M | M.Coc2191ORF1390P (91% identity) | M.Cgr12948ORF899P | |
| 900 | R | CspOS43ORF3025P (76% identity) | Cgr12948ORF899P | |
| 901 | Uncharacterised protein | |||
| 1177 | Multidrug transporter MdtC | |||
| 1178 | M | M.FnuM3733ORF1865P (98% identity) | M.Cgr12948ORF1178P | |
| 1179 | Uncharacterised protein | |||
| 1589 | recombination protein F | |||
| 1590 | RM | CspKC1668ORF40P (44% identity) | Cgr12948ORF1590P | |
| 1591 | ATP-dependent helicase HepA | |||
| 1592 | S | S4.PspQ818ORF13165P (58% identity) | S.Cgr12948ORF1590P | |
| 1593 | Ferric hydroxamate uptake | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 764 | Domain of uncharacterised function (DUF1877) | |||
| 765 | R | CcaCc2ORF1660013P (27% identity) | Cgr12948ORF766P | |
| 766 | M | M.PbrTC11ORF12515P (62% identity) | M.Cgr12948ORF766P | |
| 767 | DNA repair protein RadC | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1632 | Uncharacterised protein | |||
| 1633 | R | CspF0545McrBP (72% identity) | Cgr12948McrBP | |
| 1634 | R | Csp737McrCP (73% identity) | Cgr12948McrCP | |
| 1635 | Heat shock protein 70 | |||