Campylobacter lari NCTC 12894 |
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Putative Campylobacter lari NCTC 12894 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 1,537,889 bp
GenBank #: UFUX00000000 (NZ_UFUX00000000)
REBASE acronym: Cla12894
Org_num: 6848
All begin NCTC12894_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 34 | translation initiation factor IF-3 | |||
| 35 | M | M.ClaSBORF170P (99% identity) | RAATTY | M.Cla12894I |
| 36 | LSU ribosomal protein L35p | |||
| 1440 | integral membrane protein | |||
| 1441 | RM | Cla16701ORF1425P (92% identity) | Cla12894ORF1441P | |
| 1443 | pseudogene | |||
| 1556 | recombination factor protein RarA | |||
| 1559 | R | Csp6137ORF1106P (81% identity) | Cla12894ORF1560P | |
| 1560 | M | M2.HpySP706ORF3020P (86% identity) | M1.Cla12894ORF1560P | |
| 1561 | M | M1.HpyPO02ORF2990P (81% identity) | M2.Cla12894ORF1560P | |
| 1562 | Uncharacterized protein conserved in bacteria | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1356 | ipid-A-disaccharide synthase | |||
| 1357 | R | Cla22395ORF1350P (97% identity) | Cla12894ORF1361P | |
| 1358 | Uncharacterized protein conserved in bacteria | |||
| 1359 | Uncharacterised protein | |||
| 1360 | Uncharacterised protein | |||
| 1361 | M | M.CjeCJ017ORF1210P (98% identity) | M.Cla12894ORF1361P | |
| 1362 | cytolethal distending toxin, subunit CdtC | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 228 | McrBC restriction endonuclease system, McrB | |||
| 229 | R | ClaSCHS02McrB2P (87% identity) | Cla12894McrB2P | |
| 230 | R | Cla16701McrC2P (97% identity) | Cla12894McrC2P | |
| 231 | riboflavin biosynthesis protein | |||
| 867 | Uncharacterised protein | |||
| 868 | R | Cla218McrC2P (99% identity) | Cla12894McrCP | |
| 869 | R | ClaSCHS02McrBP (88% identity) | Cla12894McrBP | |
| 870 | Yip1 domain | |||