Campylobacter lari NCTC 12893 |
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Putative Campylobacter lari NCTC 12893 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 1,613,074 bp
GenBank #: UFVM00000000 (NZ_UFVM00000000)
REBASE acronym: Cla12893
Org_num: 42912
All begin NCTC12893_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 372 | NADP-dependent alcohol dehydrogenase | |||
| 373 | R | Cla11937ORF353P (97% identity) | TGAANNNNNTAC | Cla12893IP |
| 374 | Uncharacterised protein | |||
| 375 | S | S.Cca24001ORFCP (55% identity) | TGAANNNNNTAC | S.Cla12893I |
| 376 | M | M.Cla11937ORF353P (98% identity) | TGAANNNNNTAC | M.Cla12893I |
| 377 | molybdopterin biosynthesis protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 52 | translation initiation factor IF-3 | |||
| 53 | M | M.Cla11937ORF39P (99% identity) | RAATTY | M.Cla12893II |
| 54 | transcriptional regulator | |||
| 1212 | NAD-dependent deacetylase | |||
| ??? | RM | Car73571ORF1172P (93% identity) | Cla12893ORF1213P | |
| 1215 | recombination and DNA strand exchange inhibitor | |||
| 1511 | Uncharacterized protein containing a TIR | |||
| 1512 | RM | Cla218ORF6445P (74% identity) | Cla12893ORF1512P | |
| 1514 | pseudogene | |||
| 1626 | phage integrase family site specific | |||
| 1627 | R | R2.Cla11937ORF1579P (99% identity) | R2.Cla12893ORF1630P | |
| 1628 | R | R1.Cla11937ORF1579P (100% identity) | R1.Cla12893ORF1630P | |
| 1629 | two component transcriptional regulator | |||
| 1630 | M | M1.Cla11937ORF1579P (99% identity) | M1.Cla12893ORF1630P | |
| 1631 | M | M2.Cla11937ORF1579P (100% identity) | M2.Cla12893ORF1630P | |
| 1632 | Uncharacterized protein conserved in bacteria | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 261 | ribosome maturation protein RimP | |||
| 262 | R | Car73571McrBP (47% identity) | Cla12893McrBP | |
| 263 | R | Cor29815McrCP (97% identity) | Cla12893McrCP | |
| 264 | MoxR/RavA-like ATPase | |||