Campylobacter lanienae NCTC13003 |
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Putative Campylobacter lanienae NCTC13003 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 1,621,429 bp
GenBank #: UFVC00000000 (NZ_UFVC00000000)
REBASE acronym: Cla13003
Org_num: 42911
All begin NCTC13003_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 76 | carbonic anhydrase | |||
| 77 | M | M.Csp13003ORF77P (100% identity) | M.Cla13003ORF77P | |
| 78 | S | S.Csp13003ORF77P (100% identity) | S.Cla13003ORF77P | |
| 79 | Virulence protein | |||
| 80 | R | Csp13003ORF77P (100% identity) | Cla13003ORF77P | |
| 81 | superoxide dismutase (Cu/Zn) | |||
| 244 | periplasmic protein | |||
| 245 | M | M.Csp13003ORF246P (100% identity) | CRTANNNNNNNNTAYC | M.Cla13003I |
| 246 | S | S.Csp13003ORF246P (100% identity) | CRTANNNNNNNNTAYC | S.Cla13003I |
| 247 | R | Csp13003ORF246P (100% identity) | CRTANNNNNNNNTAYC | Cla13003IP |
| 250 | transmembrane protein | |||
| 834 | queuine tRNA-ribosyltransferase | |||
| 835 | S | S.Csp13003ORF829P (96% identity) | CRAANNNNNNNNCTT | S.Cla13003II |
| 836 | cell filamentation protein Fic | |||
| 837 | M | M.Csp13003ORF829P (100% identity) | CRAANNNNNNNNCTT | M.Cla13003II |
| 838 | R | Csp13003ORF829P (98% identity) | CRAANNNNNNNNCTT | Cla13003IIP |
| 839 | TrkA domain-containing protein | |||
| 1040 | Ammonium transporter | |||
| 1041 | M | M.Csp13003ORF1034P (100% identity) | M.Cla13003ORF1041P | |
| 1042 | S | S.Csp13003ORF1034P (40% identity) | S1.Cla13003ORF1041P | |
| 1043 | S | S.Csp13003ORF1034P (48% identity) | S2.Cla13003ORF1041P | |
| 1044 | R | Csp13003ORF1034P (100% identity) | Cla13003ORF1041P | |
| 1046 | sodium/proline symporter | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 169 | oxidoreductase, zinc-binding dehydrogenase | |||
| 170 | M | M.Csp13003ORF169P (100% identity) | M.Cla13003ORF170P | |
| 171 | ATPase | |||
| 207 | Uncharacterised protein | |||
| 208 | M | M.Csp13003ORF209P (100% identity) | CCTTC | M.Cla13003V |
| 209 | R | Csp13003ORF209P (100% identity) | CCTTC | Cla13003VP |
| 210 | phage integrase family site specific | |||
| 425 | N-(5phosphoribosyl)anthranilate isomerase | |||
| 426 | R | Csp13003ORF425P (100% identity) | RAATTY | Cla13003IIIP |
| 427 | M | M.Csp13003ORF425P (100% identity) | RAATTY | M.Cla13003III |
| 428 | anthranilate synthase component II | |||
| 1276 | DNA polymerase III subunit alpha | |||
| 1277 | M | M.Csp13003ORF1271P (100% identity) | GATC | M.Cla13003IV |
| 1278 | Uncharacterised protein | |||
| 1279 | Type-2 restriction enzyme DpnII | |||
| ??? | R | Csp13003ORF1271P (100% identity) | GATC | Cla13003IVP |
| 1280 | type II and III secretion system protein | |||
| 1297 | Uncharacterised protein | |||
| 1298 | S | S.Csp13003ORF1292P (93% identity) | S.Cla13003ORF1299P | |
| 1299 | RM | Csp13003ORF1292P (100% identity) | Cla13003ORF1299P | |
| 1301 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate | |||