Campylobacter coli NCTC12885 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Campylobacter coli NCTC12885 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 1,843,767 bp
GenBank #: UFUK00000000 (NZ_UFUK00000000)
REBASE acronym: Cco12885
Org_num: 42898
All begin NCTC12885_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 230 | alpha/beta hydrolase | |||
| 231 | M | M.Ccos1875ORFAP (100% identity) | M.Cco12885ORF231P | |
| ??? | S | S.Cco5137ORF815P (100% identity) | S.Cco12885ORF231P | |
| 232 | modification methylase StsI | |||
| 746 | succinyl-diaminopimelate desuccinylase | |||
| 747 | M | M.CcopORFBP (100% identity) | M.Cco12885ORF747P | |
| 748 | RlfA | |||
| 749 | Uncharacterised protein | |||
| 750 | S | S.Cco144ORF5315P (100% identity) | S.Cco12885ORF747P | |
| 751 | Sulfur carrier protein ThiS | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1829 | Uncharacterised protein | |||
| ??? | C | C.Cla16712ORF409P (100% identity) | C.Cco12885IVP | |
| 1830 | R | CjeJ048ORF3210P (100% identity) | ACTAGT | Cco12885IVP |
| 1831 | M | M.Cla16712ORF409P (100% identity) | ACTAGT | M.Cco12885IV |
| 1832 | Transposase and inactivated derivatives | |||
| 36 | DNA helicase | |||
| 37 | RM | Cco12884IV (100% identity) | CAAGAA | Cco12885III |
| 38 | predicted ATP-dependent endonuclease of the OLD | |||
| 231 | Type I restriction-modification system, | |||
| 232 | M | M2.Cje5174ORF5315P (100% identity) | M.Cco12885ORF232P | |
| 233 | AlwI restriction endonuclease | |||
| 232 | modification methylase StsI | |||
| 233 | R | Cco5137ORF800P (100% identity) | GCATC | Cco12885VP |
| 234 | M | M1.Cje5174ORF5315P (100% identity) | GCATC | M.Cco12885V |
| 235 | oxidoreductase, zinc-binding dehydrogenase | |||
| 742 | recombination and DNA strand exchange inhibitor | |||
| 743 | RM | Cco12884ORF741P (100% identity) | Cco12885ORF743P | |
| 744 | NAD-dependent protein deacetylase of SIR2 | |||
| 886 | Uncharacterised protein | |||
| 887 | M | M.Cco1466ORF8895P (100% identity) | M.Cco12885ORF887P | |
| 888 | Uncharacterised protein | |||
| 1569 | Uncharacterised protein | |||
| ??? | M | M.Cco32ORF7380P (100% identity) | GATC | M.Cco12885II |
| 1571 | Carbamoyl-phosphate synthase large chain | |||
| 1627 | N-acetyl-gamma-glutamyl-phosphate reductase | |||
| 1628 | M | M.Ccos32805ORF3585P (100% identity) | RAATTY | M.Cco12885I |
| 1629 | Translation initiation factor 3 | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1221 | DNA polymerase III subunit delta | |||
| 1222 | R | Cco1466ORF7255P (100% identity) | Cco12885ORF1223P | |
| 1223 | M | M.Cco1466ORF7255P (100% identity) | M.Cco12885ORF1223P | |
| 1224 | [NiFe] hydrogenase nickel incorporation protein | |||