Campylobacter coli NCTC12884 |
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Putative Campylobacter coli NCTC12884 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 1,837,136 bp
GenBank #: UFUM00000000 (NZ_UFUM00000000)
REBASE acronym: Cco12884
Org_num: 42897
All begin NCTC12884_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 230 | alpha/beta hydrolase | |||
| 231 | M | M.Ccos1875ORFAP (100% identity) | M.Cco12884ORF231P | |
| ??? | S | S.Cco5137ORF815P (100% identity) | S.Cco12884ORF231P | |
| 232 | modification methylase StsI | |||
| 744 | succinyl-diaminopimelate desuccinylase | |||
| 745 | M | M.CcopORFBP (100% identity) | M.Cco12884ORF745P | |
| 746 | RlfA | |||
| 747 | Uncharacterised protein | |||
| 748 | S | S.Cco144ORF5315P (100% identity) | S.Cco12884ORF745P | |
| 749 | Sulfur carrier protein ThiS | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1859 | Transposase and inactivated derivatives | |||
| 1860 | M | M.Cla16712ORF409P (100% identity) | M.Cco12884ORF1860P | |
| 1861 | R | CjeJ048ORF3210P (100% identity) | Cco12884ORF1860P | |
| ??? | C | C.Cla16712ORF409P (100% identity) | C.Cco12884ORF1860P | |
| 1862 | Uncharacterised protein | |||
| 36 | DNA helicase | |||
| 37 | RM | Cco12885III (100% identity) | CAAGAA | Cco12884IV |
| 38 | predicted ATP-dependent endonuclease of the OLD | |||
| 231 | Type I restriction-modification system, | |||
| 232 | M | M2.Cje5174ORF5315P (100% identity) | M.Cco12884ORF232P | |
| 233 | AlwI restriction endonuclease | |||
| 232 | modification methylase StsI | |||
| 233 | R | Cco5137ORF800P (100% identity) | GCATC | Cco12884IIIP |
| 234 | M | M1.Cje5174ORF5315P (100% identity) | GCATC | M.Cco12884III |
| 235 | oxidoreductase, zinc-binding dehydrogenase | |||
| 740 | recombination and DNA strand exchange inhibitor | |||
| 741 | RM | Cco12885ORF743P (100% identity) | Cco12884ORF741P | |
| 742 | NAD-dependent protein deacetylase of SIR2 | |||
| 884 | Uncharacterised protein | |||
| 885 | M | M.Cco1466ORF8895P (100% identity) | M.Cco12884ORF885P | |
| 886 | Uncharacterised protein | |||
| 1565 | Uncharacterised protein | |||
| ??? | M | M.Cco32ORF7380P (100% identity) | GATC | M.Cco12884II |
| 1567 | Carbamoyl-phosphate synthase large chain | |||
| 1623 | N-acetyl-gamma-glutamyl-phosphate reductase | |||
| 1624 | M | M.Ccos32805ORF3585P (100% identity) | RAATTY | M.Cco12884I |
| 1625 | Translation initiation factor 3 | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1218 | DNA polymerase III subunit delta | |||
| 1219 | R | Cco1466ORF7255P (100% identity) | Cco12884ORF1220P | |
| 1220 | M | M.Cco1466ORF7255P (100% identity) | M.Cco12884ORF1220P | |
| 1221 | [NiFe] hydrogenase nickel incorporation protein | |||