Brachyspira pilosicoli NCTC12874 |
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Putative Brachyspira pilosicoli NCTC12874 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 2,719,278 bp
GenBank #: UFTP00000000 (NZ_UFTP00000000)
REBASE acronym: Bpi12874
Org_num: 39473
All begin NCTC12874_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1972 | ribonuclease R | |||
| 1973 | S | S2.CleH6253ORF7835P (34% identity) | GRNTANNNNNNNNNTGG | S.Bpi12874IV |
| 1974 | M | M.Bpi1243ORF10295P (99% identity) | GRNTANNNNNNNNNTGG | M.Bpi12874IV |
| 1975 | R | Bpi1243ORF10295P (98% identity) | GRNTANNNNNNNNNTGG | Bpi12874IVP |
| 1976 | Holliday junction DNA helicase RuvB | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1319 | diguanylate cyclase | |||
| 1320 | M | M.Bpi1244ORF3465P (99% identity) | TTTAAA | M.Bpi12874I |
| 1321 | bifunctional GMP synthase/glutamine | |||
| 1504 | D12 class N6 adenine-specific DNA | |||
| 1505 | M | M.Bpi13046ORF740P (100% identity) | M.Bpi12874ORF1505P | |
| 1506 | phage terminase large subunit | |||
| 446 | valyl tRNA synthetase | |||
| 447 | M | M.Bpi13046ORF1136P (100% identity) | M.Bpi12874ORF447P | |
| 448 | Ig domain protein | |||
| 1683 | Uncharacterised protein | |||
| 1684 | RM | Bpi2904ORF814P (47% identity) | Bpi12874ORF1684BP | |
| 1685 | KAP NTPase P-loop domain-containing | |||
| 1686 | RM | Bpi1268ORF195P (95% identity) | Bpi12874ORF1684AP | |
| 1687 | Uncharacterised protein | |||
| 1801 | aldose-1-epimerase | |||
| 1802 | M | M.Bpi43ORF11780P (99% identity) | RAATTY | M.Bpi12874II |
| 1803 | DNA integration/recombination/invertion protein | |||
| 761 | 3-oxoacyl-ACP synthase | |||
| 762 | M | M.Bpi7141ORF7270P (100% identity) | M.Bpi12874ORF762P | |
| 763 | acetyl-CoA acetyltransferase | |||
| 2083 | ATP-dependent protease La | |||
| 2084 | M | M.Bpi1268ORF9460P (97% identity) | CCWGG | M.Bpi12874III |
| 2085 | SAM domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 512 | chorismate synthase | |||
| 513 | R | Bpi1145McrCP (99% identity) | Bpi12874McrCP | |
| 514 | R | Bpi1145McrBP (84% identity) | Bpi12874McrBP | |
| 515 | metal-dependent glycoprotease | |||