Bergeriella denitrificans NCTC10295 |
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Putative Bergeriella denitrificans NCTC10295 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 2,549,372 bp
GenBank #: UGQS00000000 (NZ_UGQS00000000)
REBASE acronym: Bde10295
Org_num: 39250
All begin NCTC10295_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1304 | Type I restriction modification DNA specificity | |||
| 1305 | M | M.NdeIV (100% identity) | GAGNNNNNNGTTY | M.Bde10295I |
| 1306 | Uncharacterised protein | |||
| 1307 | S | S.NdeIV (100% identity) | GAGNNNNNNGTTY | S.Bde10295I |
| 1308 | Divergent AAA domain | |||
| 1309 | R | NdeIVP (100% identity) | GAGNNNNNNGTTY | Bde10295IP |
| 1310 | Predicted ATPase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 875 | Uncharacterised protein | |||
| 876 | M | M.NdeORFGP (100% identity) | M.Bde10295ORF876P | |
| 877 | Uncharacterised protein | |||
| 36 | Uncharacterised protein | |||
| 37 | M | M.NdeORFGP (100% identity) | M.Bde10295ORF37P | |
| 38 | Uncharacterised protein | |||
| 68 | peptidase | |||
| 69 | M | M.NdeORFJP (70% identity) | M.Bde10295ORF69P | |
| 70 | leucyl/phenylalanyl-tRNA--protein transferase | |||
| 96 | UvrD | |||
| ??? | M | M2.NdeORFDP (99% identity) | M1.Bde10295ORF97P | |
| 98 | M | M1.NdeORFDP (81% identity) | M2.Bde10295ORF97P | |
| 99 | R | NdeORFDP (100% identity) | Bde10295ORF97P | |
| 100 | S-adenosylmethionine--tRNA | |||
| 1117 | Uncharacterised protein | |||
| 1118 | M | M.NdeORFEP (100% identity) | M.Bde10295ORF1118P | |
| 1119 | transferase | |||
| 1640 | Transposase and inactivated derivatives | |||
| 1641 | M | M.NdeI (100% identity) | CATATG | M.Bde10295II |
| 1642 | R | NdeI (98% identity) | CATATG | Bde10295IIP |
| 1643 | prophage regulator protein | |||
| 2173 | phage associated protein | |||
| 2174 | M | M.NdeORFFP (100% identity) | M.Bde10295ORF2174P | |
| 2175 | Uncharacterised protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 969 | queuine tRNA-ribosyltransferase | |||
| 970 | R | NdeORFCP (100% identity) | Bde10295ORF971P | |
| 971 | M | M.NdeORFCP (98% identity) | M.Bde10295ORF971P | |
| 972 | cell-division protein | |||
| 1314 | Arginase | |||
| 1315 | R | NdeORFBP (100% identity) | Bde10295ORF1316P | |
| 1316 | M | M.NdeORFBP (100% identity) | M.Bde10295ORF1316P | |
| 1317 | integral membrane protein | |||
| 1431 | restriction modification protein Mod | |||
| ??? | M | M.NdeIII (77% identity) | M.Bde10295ORF1432P | |
| 1433 | R | NdeIIIP (100% identity) | Bde10295ORF1432P | |
| 1434 | Transposase and inactivated derivatives | |||