Bacteroides vulgatus NCTC10583 |
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Putative Bacteroides vulgatus NCTC10583 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,947,907 bp
GenBank #: UFTE00000000 (NZ_UFTE00000000)
REBASE acronym: Bvu10583
Org_num: 39247
All begin NCTC10583_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1610 | Uncharacterised protein | |||
| ??? | R | PvuC06ORF3690P (99% identity) | CYYANNNNNNNCTTG | Bvu10583IIP |
| 1616 | M | M.Pvu201ORF22395P (99% identity) | CYYANNNNNNNCTTG | M.Bvu10583II |
| 1617 | S | S1.Pvu1099ORF3610P (99% identity) | CCANNNNNNNRTTG | S1.Bvu10583IIP |
| 1618 | S | S2.Pvu3C24ORF1046P (99% identity) | CYYANNNNNNNCTTG | S2.Bvu10583II |
| ??? | S | S4.Pvu3C24ORF1046P (100% identity) | S3.Bvu10583IIP | |
| ??? | S | S3.Pvu201ORF22395P (100% identity) | S4.Bvu10583IIP | |
| 1620 | S | S5.Pvu1098ORF7795P (100% identity) | CAAGNNNNNNNTRRG | S5.Bvu10583IIP |
| 1621 | Uncharacterised protein | |||
| 3392 | helix-turn-helix domain-containing protein | |||
| 3393 | M | M.Pvu191ORF6600P (99% identity) | ATGNNNNNGCT | M.Bvu10583I |
| 3394 | S | S.Pvu191ORF6600P (100% identity) | ATGNNNNNGCT | S.Bvu10583I |
| 3395 | R | Pvu191ORF6600P (100% identity) | ATGNNNNNGCT | Bvu10583IP |
| 3396 | helicase, RecD/TraA family | |||
| 3903 | Uncharacterised protein | |||
| 3904 | S | S4.Pvu3C24ORF1046P (100% identity) | S3.Bvu10583IIP | |
| 3905 | integrase | |||
| 3906 | S | S2.Pvu3C24ORF1046P (99% identity) | CYYANNNNNNNCTTG | S2.Bvu10583II |
| 3907 | S | S1.Pvu1099ORF3610P (99% identity) | CCANNNNNNNRTTG | S1.Bvu10583IIP |
| 3908 | M | M.Pvu201ORF22395P (99% identity) | CYYANNNNNNNCTTG | M.Bvu10583II |
| 3909 | R | PvuC06ORF3690P (99% identity) | CYYANNNNNNNCTTG | Bvu10583IIP |
| 3910 | type I restriction-modification system protein | |||
| 3911 | C | C.BvumpkORF3687P (100% identity) | C.Bvu10583IIP | |
| 3912 | Uncharacterised protein | |||
| 1213 | Helix-turn-helix. | |||
| 1214 | R | Bth446ORF12680P (100% identity) | Bvu10583ORF1215P | |
| 1215 | M | M.Bth446ORF12680P (100% identity) | M.Bvu10583ORF1215P | |
| 1216 | DNA-binding protein | |||
| 1217 | filamentation induced by cAMP protein fic | |||
| 1218 | Uncharacterised protein | |||
| 1219 | S | S1.Bsa288ORF9920P (19% identity) | S1.Bvu10583ORF1215P | |
| 1220 | S | S1.Ral7ORF3907P (7% identity) | S2.Bvu10583ORF1215P | |
| ??? | S | S2.CbaCCNA10ORFIP (20% identity) | S3.Bvu10583ORF1215P | |
| 1221 | S | S1.Bth446ORF12680P (35% identity) | S4.Bvu10583ORF1215P | |
| 1222 | S | S2.Bth446ORF12680P (100% identity) | S5.Bvu10583ORF1215P | |
| 1223 | S | S1.Bth446ORF12680P (54% identity) | CCANNNNNNNRTTG | S6.Bvu10583ORF1215P |
| 1224 | Site-specific recombinase XerD | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3982 | ABC oligo/dipeptide transport, ATP-binding | |||
| ??? | M | M.Bth10582ORF1563P (100% identity) | M.Bvu10583ORF3983P | |
| 3984 | Uncharacterised protein | |||
| 162 | Uncharacterised protein | |||
| 163 | M | M.Pdo1051ORF13020P (67% identity) | M.Bvu10583ORF163P | |
| 164 | two-component system sensor histidine kinase | |||
| 173 | helix-turn-helix domain-containing protein | |||
| 174 | M | M.Pst18206ORF2235P (81% identity) | M.Bvu10583ORF174P | |
| 175 | R | Pst18206ORF2235P (71% identity) | Bvu10583ORF174P | |
| 176 | V | V.Pvu626ORF15700P (80% identity) | V.Bvu10583ORF174P | |
| 177 | Uncharacterised protein | |||
| 512 | Uncharacterised protein | |||
| 513 | M | M.Pvu191ORF9415P (98% identity) | M.Bvu10583ORF513P | |
| 514 | R | R1.Pvu191ORF9415P (100% identity) | Bvu10583ORF513P | |
| 515 | Uncharacterised protein | |||
| 593 | Uncharacterised protein | |||
| 594 | M | M1.Pvu0103ORF30520P (89% identity) | M1.Bvu10583ORF594P | |
| 595 | M | M.Bvu510ORF1269P (100% identity) | M2.Bvu10583ORF594P | |
| 596 | Uncharacterised protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2570 | Uncharacterised protein | |||
| 2571 | R | PspDCY84ORF15220P (51% identity) | Bvu10583ORF2572P | |
| 2572 | M | M.NgoWFI (43% identity) | M.Bvu10583ORF2572P | |
| 2573 | oxidoreductase | |||