Bacteroides fragilis NCTC9343 |
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Putative Bacteroides fragilis NCTC9343 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,315,005 bp
GenBank #: UFTH00000000 (NZ_UFTH00000000)
REBASE acronym: Bfr9343
Org_num: 39241
All begin NCTC9343_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2679 | DNA-binding protein | |||
| 2680 | M | M.Bfr9343DII (100% identity) | CNAGNNNNNNTGA | M.Bfr9343II |
| 2681 | S | S.Bfr9343DII (100% identity) | CNAGNNNNNNTGA | S.Bfr9343II |
| 2682 | R | Bfr9343DIIP (100% identity) | CNAGNNNNNNTGA | Bfr9343IIP |
| 2683 | Protein of uncharacterised function DUF45 | |||
| 3030 | Uncharacterised protein | |||
| ??? | C | C.BspZJ18ORF9925P (100% identity) | C.Bfr9343ORF3032P | |
| 3031 | R | Bfr9343DORFFP (100% identity) | Bfr9343ORF3032P | |
| 3032 | M | M.Bsp2737ORF11960P (100% identity) | M.Bfr9343ORF3032P | |
| 3033 | DNA-binding protein | |||
| 3034 | death-on-curing family protein | |||
| 3035 | S | S.Bfr9343DORFFP (100% identity) | S.Bfr9343ORF3032P | |
| 3036 | transposase | |||
| 3409 | Uncharacterised protein | |||
| 3410 | C | C.Bfr9343DIVP (100% identity) | C.Bfr9343IVP | |
| 3411 | R | Bfr9343DIVP (100% identity) | GAGNNNNNNTGC | Bfr9343IVP |
| 3412 | Uncharacterized conserved protein | |||
| 3413 | M | M.Bfr9343DIV (100% identity) | GAGNNNNNNTGC | M.Bfr9343IV |
| 3414 | S | S.BfaSIHP (100% identity) | GAGNNNNNNTGC | S1.Bfr9343IV |
| 3415 | S | S3.Bfr9343DIVP (90% identity) | S2.Bfr9343IVP | |
| ??? | S | S1.Bfr9343DIV (47% identity) | S3.Bfr9343IVP | |
| 3416 | S | S.BfaSID (96% identity) | S4.Bfr9343IVP | |
| 3417 | phage integrase/recombinase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 638 | Plasmid recombination enzyme. | |||
| 639 | M | M.Bfr9343DI (100% identity) | ATGCAT | M.Bfr9343I |
| 640 | R | Bfr9343DIP (100% identity) | ATGCAT | Bfr9343IP |
| 641 | Uncharacterised protein | |||
| 2678 | HipA domain protein | |||
| 2679 | C | C.Bfr9343DIIP (91% identity) | C.Bfr9343ORF2679P | |
| 2680 | modification protein of type I | |||
| 2842 | Uncharacterised protein | |||
| 2843 | RM | Bfr9343DIII (100% identity) | GANGGAG | Bfr9343III |
| 2844 | Uncharacterised protein | |||
| 3078 | Mor transcription activator domain-containing | |||
| 3079 | M | M.PmeBin12ORFDP (96% identity) | M.Bfr9343ORF3079P | |
| 3080 | choloylglycine hydrolase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2665 | ribosomal large subunit pseudouridine | |||
| 2666 | R | Bfr9ORF8795P (100% identity) | Bfr9343ORF2667P | |
| 2667 | M | M.BfrFAAORFBP (99% identity) | M.Bfr9343ORF2667P | |
| 2668 | glycosyl hydrolase | |||
| 2711 | Uncharacterised protein | |||
| 2712 | M | M.Bfr9343DORFEP (100% identity) | M.Bfr9343ORF2712P | |
| 2713 | DNA-binding protein | |||
| 2714 | R | Pvu201ORF19755P (100% identity) | Bfr9343ORF2712P | |
| 2715 | ATP/GTP-binding protein | |||