Avibacterium paragallinarum NCTC10926 |
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Putative Avibacterium paragallinarum NCTC10926 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 2,790,137 bp
GenBank #: UFSW00000000 (NZ_UFSW00000000)
REBASE acronym: Apa10926
Org_num: 39226
All begin NCTC10926_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1563 | Predicted phosphoesterase or phosphohydrolase | |||
| 1565 | R | ApaCLORF10880P (100% identity) | Apa10926ORF1571P | |
| 1566 | Predicted transcriptional regulator | |||
| 1567 | Uncharacterised protein | |||
| 1568 | Uncharacterised protein | |||
| 1569 | Uncharacterised protein | |||
| 1570 | S | S.ApaCLORF7570P (100% identity) | S.Apa10926ORF1571P | |
| 1571 | M | M.ApaCLORF7570P (81% identity) | M.Apa10926ORF1571P | |
| 1572 | Uncharacterized lipoprotein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3048 | Uncharacterised protein | |||
| 3049 | M | M1.ApaCLORF9750P (100% identity) | M1.Apa10926ORF2046P | |
| 3050 | Uncharacterised protein | |||
| 289 | Uncharacterised protein | |||
| 290 | M | M.ApaCLORF10045P (99% identity) | M.Apa10926ORF290P | |
| 291 | Uncharacterised protein | |||
| 455 | Protein of uncharacterised function (DUF1367) | |||
| 456 | M | M.ApaESV135ORF2155P (100% identity) | GATC | M.Apa10926ORF456P |
| 457 | DNA replication protein dnaC | |||
| 2852 | Replication protein P | |||
| ??? | M | M.Apa10926ORF2181P (87% identity) | M.Apa10926ORF2853P | |
| 2855 | Uncharacterised protein | |||
| 786 | Chromosome partition protein mukF | |||
| 787 | R | Apa11296ORF1055P (100% identity) | Apa10926ORF788P | |
| 788 | M | M.ApasMORFEP (100% identity) | M.Apa10926ORF788P | |
| 789 | Chromosome partition protein mukE | |||
| 1240 | Valine--tRNA ligase | |||
| 1241 | R | ApaCLORF6155P (100% identity) | Apa10926ORF1242P | |
| ??? | M | M.ApasMORFFP (97% identity) | M.Apa10926ORF1242P | |
| 1243 | Uncharacterized protein conserved in bacteria | |||
| 1897 | Threonine synthase | |||
| 1898 | M | M.ApaCLORF9135P (100% identity) | CATG | M1.Apa10926ORF1898P |
| 1899 | R | ApasMORFGP (99% identity) | Apa10926ORF1898P | |
| ??? | M | M.ApaCLORF10475P (100% identity) | CATG | M2.Apa10926ORF1898P |
| 1902 | reductase | |||
| 2045 | Uncharacterised protein | |||
| 2046 | M | M1.ApaCLORF9750P (100% identity) | M1.Apa10926ORF2046P | |
| 2047 | Uncharacterised protein | |||
| 2180 | Replication protein P | |||
| ??? | M | M.ApaESV135ORF2155P (93% identity) | M.Apa10926ORF2181P | |
| 2183 | Uncharacterised protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2396 | Cytosol non-specific dipeptidase | |||
| 2397 | R | ApaCLORF6860P (100% identity) | Apa10926ORF2120P | |
| 2398 | methyltransferase | |||
| 2397 | type III restriction-modification system StyLTI | |||
| 2398 | M | M.ApasMORFCP (94% identity) | M.Apa10926ORF2398P | |
| 2399 | Predicted acetyltransferase | |||
| 494 | site-specific tyrosine recombinase XerC | |||
| 498 | R | ApaCLORF7425P (100% identity) | Apa10926ORF499P | |
| ??? | M | M.ApaMORFBP (99% identity) | M.Apa10926ORF499P | |
| 502 | D-malate degradation protein R | |||
| 2118 | Cytosol non-specific dipeptidase | |||
| 2119 | R | ApaCLORF6860P (100% identity) | Apa10926ORF2120P | |
| 2120 | M | M.ApaCLORF6860P (92% identity) | M.Apa10926ORF2120P | |
| 2121 | Uncharacterised protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2646 | Protein of uncharacterised function (DUF721) | |||
| ??? | M | M.Apa11296ORF2571P (100% identity) | GATC | M.Apa10926ORF2647P |
| 2648 | 3-dehydroquinate synthase | |||