Actinobacillus pleuropneumoniae NCTC11407 |
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Putative Actinobacillus pleuropneumoniae NCTC11407 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 2,391,829 bp
GenBank #: UIFY00000000 (NZ_UIFY00000000)
REBASE acronym: Apl11407
Org_num: 39195
All begin NCTC11407_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 24 | bifunctional glutamate--cysteine | |||
| 25 | S | S1.AplFemORF8500P (84% identity) | S2.Apl11407ORF29P | |
| 26 | integrase | |||
| 27 | S | S1.Apl8ORF1574P (99% identity) | S1.Apl11407ORF29P | |
| 28 | DNA binding protein | |||
| 29 | M | M.AplS4074ORF8040P (100% identity) | M.Apl11407ORF29P | |
| 30 | R | AplFemORF8500P (100% identity) | Apl11407ORF29P | |
| 31 | phosphatidylserine decarboxylase | |||
| 970 | DNA gyrase subunit A | |||
| 971 | M | M.AplFemORF1505P (100% identity) | AAAYNNNNNNCTC | M.Apl11407II |
| 972 | DNA-binding protein | |||
| 973 | Abortive infection bacteriophage resistance | |||
| 974 | S | S.AplFemORF1505P (100% identity) | AAAYNNNNNNCTC | S.Apl11407II |
| 975 | anticodon nuclease | |||
| 976 | R | AplFemORF1505P (100% identity) | AAAYNNNNNNCTC | Apl11407IIP |
| 977 | ABC transporter ATPase | |||
| 2333 | bifunctional glutamate--cysteine | |||
| 2334 | S | S2.AplFemORF8500P (100% identity) | S1.Apl11407ORF2338P | |
| 2335 | integrase | |||
| 2336 | S | S1.AplFemORF8500P (100% identity) | S2.Apl11407ORF2338P | |
| 2337 | DNA binding protein | |||
| 2338 | M | M.AplS4074ORF8040P (83% identity) | M.Apl11407ORF2338P | |
| 2339 | Type I restriction-modification system M | |||
| ??? | R | AplS8ORFFP (52% identity) | Apl11407ORF2338P | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 867 | sodium-dependent transporter | |||
| 868 | M | M.AplS4074ORF995P (100% identity) | GATC | M.Apl11407I |
| 869 | 3-dehydroquinate synthase | |||
| 1223 | replicative DNA helicase | |||
| 1224 | M | M.AplFemORF3055P (100% identity) | M.Apl11407ORF1224P | |
| 1225 | Protein of uncharacterised function (DUF1367) | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1234 | Protein of uncharacterised function (DUF2570) | |||
| 1235 | M | M.Apl13ORF4910P (99% identity) | M.Apl11407ORF1235P | |
| 1236 | Terminase small subunit | |||
| 1443 | ATP-dependent helicase | |||
| 1444 | R | AplFemORF4110P (100% identity) | Apl11407ORF1445P | |
| 1445 | M | M.AplFemORF4110P (100% identity) | M.Apl11407ORF1445P | |
| 1446 | HTH-type transcriptional regulator | |||
| 1578 | YcaO-like family | |||
| 1579 | R | AplFemORF4765P (100% identity) | Apl11407ORF1580P | |
| 1580 | M | M.AplP1421ORF3995P (100% identity) | M.Apl11407ORF1580P | |
| 1581 | tRNA mo(5)U34 methyltransferase | |||