Ref: Doyle,S. unpublished

REBASE ref # 22501

Contig set: 3,655,558 bp

GenBank #: UFRV00000000 (NZ_UFRV00000000)

REBASE acronym: Ajo10308

Org_num: 39172

 

All begin NCTC10308_

Type I
ORF Gene Most similar Specificity Name
 
26 Uncharacterised protein
??? M M.AspVer3ORF13775P (50% identity) M.Ajo10308ORF27AP
29 transposase/IS protein
30 M M.Ajo10308ORF39P (100% identity) M.Ajo10308ORF27BP
??? S S.Ajo910ORF13245P (99% identity) S.Ajo10308ORF27P
32 transposase
 
36 Transposase-like protein
??? S S.Ajo910ORF13245P (93% identity) S.Ajo10308ORF39P
39 M M.Ajo10308ORF27BP (100% identity) M.Ajo10308ORF39P
40 Transposase and inactivated derivatives
 
2125 transposase component
2126 R Ajo910ORF3170P (100% identity) CACNNNNNNRTTT Ajo10308IIP
2127 Uncharacterized protein conserved in bacteria
2128 S S.Ajo910ORF3170P (100% identity) CACNNNNNNRTTT S.Ajo10308II
2129 M M.Ajo910ORF3170P (100% identity) CACNNNNNNRTTT M.Ajo10308II
2130 DNA ligase
 
3490 signal peptide
3491 M M.Ajo910ORF14160P (100% identity) CTGANNNNNNTGG M.Ajo10308I
3492 ATP-dependent DNA helicase
3493 S S.Ajo910ORF14160P (94% identity) CTGANNNNNNTGG S.Ajo10308I
3494 Uncharacterized protein conserved in bacteria
3495 R Ajo910ORF14160P (100% identity) CTGANNNNNNTGG Ajo10308IP
3496 transcriptional regulator
Type II
ORF Gene Most similar Specificity Name
 
58 Uncharacterised protein
59 R Ajo910ORF5P (100% identity) CTGCAG Ajo10308IIIP
60 M M.Ajo910ORF5P (100% identity) CTGCAG M.Ajo10308III
61 TonB family C-terminal domain
 
637 Uncharacterised protein
638 M M.Ajo910ORF10435P (94% identity) M.Ajo10308ORF638P
639 histidine kinase
 
3142 ribD
3143 M M.BspHORF2425P (100% identity) RAATTY M.Ajo10308ORF3143P
3144 riboflavin synthase subunit alpha
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