Escherichia coli NBRC3301 |
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Putative Escherichia coli NBRC3301 RM systems
Ref: Tourlousse,D.M. et al. unpublished
REBASE ref # 30118
| Sequence length: | GenBank #: | |
| Chromosome: | 4,656,310 bp | CP048439 |
| plasmid putative_pEcol1: | 98,786 bp | CP048440 |
REBASE acronym: Eco3301
Org_num: 39331
All begin GXM24_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| ??? | methylated adenine and cytosine restriction protein | |||
| 19280 | R | Msa17ORFC2P (98% identity) | AACNNNNNNGTGC | Eco3301ORF19285P |
| 19285 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.Eco3301ORF19285P |
| 19290 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.Eco3301ORF19285P |
| 19295 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1615 | cell division protein DamX | |||
| 1620 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco3301DamP |
| 1625 | ribulose-phosphate 3-epimerase | |||
| 2240 | DUF2556 domain-containing protein | |||
| 2245 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.Eco3301ORF2245P |
| 2250 | DNA-binding transcriptional regulator Fis | |||
| 8615 | phosphohydrolase | |||
| 8620 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco3301DcmP |
| 8625 | V | V.SflFF64DcmP (100% identity) | V.Eco3301DcmP | |
| 8630 | drug/metabolite exporter YedA | |||
| plasmid putative_pEcol1 | ||||
| 22970 | 73 aa hypothetical protein | |||
| 22975 | M | M.SflN92ORF24820P (100% identity) | M.Eco3301ORF22975P | |
| 22980 | 101 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12790 | isocitrate dehydrogenase | |||
| 12795 | R | SsoSE61ORF22640P (100% identity) | YCGR | Eco3301ORF12795P |
| 12800 | site-specific DNA recombinase | |||
| 19270 | GTPase | |||
| ??? | R | EcoZK126MrrP (100% identity) | Eco3301MrrP | |
| 19280 | type I restriction-modification system | |||
| 19270 | GTPase | |||
| 19275 | R | SenHNK130MrrP (100% identity) | Eco3301Mrr2P | |
| 19280 | type I restriction-modification system | |||
| 19295 | endoribonuclease SymE | |||
| 19300 | R | SenHNK130McrBP (100% identity) | Eco3301McrBP | |
| 19305 | R | SenHNK130McrCP (100% identity) | Eco3301McrCP | |
| 19310 | 906 aa hypothetical protein | |||