Paenibacillus larvae subsp. larvae Eric_V |
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Putative Paenibacillus larvae subsp. larvae Eric_V RM systems
Ref: Beims,H. et al. Int. J. Med. Microbiol. 310 (2), 151394 (2020)
REBASE ref # 30142
Complete sequence: 4,672,437 bp
GenBank #: CP019717
REBASE acronym: PlacV
Org_num: 39354
All begin ERICV_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1943 | type I restriction enzyme EcoKI subunit R-like | |||
| 1944 | S | S.PlaPL006ORF22270P (93% identity) | S.PlacVORF1943P | |
| 1945 | DNA helicase | |||
| 4270 | 434 aa hypothetical protein | |||
| 4271 | R | PlaPL006ORF20425P (99% identity) | PlacVORF4273P | |
| 4272 | S | S.PlaMEX14ORFDP (99% identity) | S.PlacVORF4273P | |
| 4273 | M | M.PlaPL006ORF20425P (99% identity) | M.PlacVORF4273P | |
| 4274 | 84 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1526 | 152 aa hypothetical protein | |||
| 1527 | M | M.PlacVORF1743P (100% identity) | M.PlacVORF1527P | |
| 1528 | 56 aa hypothetical protein | |||
| 1742 | 152 aa hypothetical protein | |||
| 1743 | M | M.PlacVORF1527P (100% identity) | M.PlacVORF1743P | |
| 1744 | 56 aa hypothetical protein | |||
| 2030 | 127 aa hypothetical protein | |||
| 2031 | M | M.PlaPL006ORF3400P (98% identity) | M.PlacVORF2031P | |
| 2032 | 135 aa hypothetical protein | |||
| 2150 | 76 aa hypothetical protein | |||
| 2151 | M | M.PlacVORF3649P (89% identity) | M.PlacVORF2151P | |
| 2152 | 102 aa hypothetical protein | |||
| 2722 | 315 aa hypothetical protein | |||
| 2723 | R | PlaMEX14ORFEP (57% identity) | PlacVORF2731P | |
| 2724 | transposase | |||
| 2725 | transposase | |||
| 2726 | 57 aa hypothetical protein | |||
| 2727 | 55 aa hypothetical protein | |||
| 2728 | phage integrase family protein | |||
| 2729 | transposase | |||
| 2730 | 38 aa hypothetical protein | |||
| 2731 | M | M.PlaPL006ORF5680P (100% identity) | M.PlacVORF2731P | |
| 2732 | 114 aa hypothetical protein | |||
| 3214 | RNA polymerase sigma factor, sigma-70 family | |||
| 3215 | M | M.PlacVORF2031P (76% identity) | M.PlacVORF3215P | |
| 3216 | Modification methylase TaqI | |||
| 3215 | modification methylase | |||
| 3216 | M | M.PlaPL006ORF3395P (90% identity) | M.PlacVORF3216P | |
| 3217 | 127 aa hypothetical protein | |||
| 3329 | 102 aa hypothetical protein | |||
| 3330 | M | M.PlacVORF3649P (100% identity) | M.PlacVORF3330P | |
| 3331 | 173 aa hypothetical protein | |||
| 3648 | 102 aa hypothetical protein | |||
| 3649 | M | M.PlacVORF3330P (100% identity) | M.PlacVORF3649P | |
| 3650 | 173 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4290 | helix-turn-helix domain-containing protein | |||
| 4292 | R | PlaPL006ORF20335P (100% identity) | PlacVORF4292P | |
| 4293 | 169 aa hypothetical protein | |||