Raoultella ornithinolytica 23 |
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Putative Raoultella ornithinolytica 23 RM systems
Ref: Nuesch-Inderbinen,M. et al. unpublished
REBASE ref # 30123
| Sequence length: | GenBank #: | |
| Chromosome: | 5,725,169 bp | CP048349 |
| plasmid p23_A-OXA140: | 279,792 bp | CP048350 |
| plasmid p23_B: | 146,470 bp | CP048351 |
| plasmid p23_C: | 143,891 bp | CP048352 |
REBASE acronym: Ror23
Org_num: 39365
All begin GZS10_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23380 | PLP-dependent aminotransferase family protein | |||
| 23385 | R | RspX13ORF22405P (99% identity) | AAGNNNNNNNNTRGG | Ror23ORF23390P |
| 23390 | M | M.Rsp2415ORFAP (99% identity) | AAGNNNNNNNNTRGG | M.Ror23ORF23390P |
| 23395 | S | S.RspX13ORF22405P (100% identity) | AAGNNNNNNNNTRGG | S.Ror23ORF23390P |
| 23400 | endoribonuclease SymE | |||
| plasmid p23_B | ||||
| 29035 | 76 aa hypothetical protein | |||
| 29040 | M | M.Kqu476ORF26340P (100% identity) | M.Ror23ORF29040P | |
| 29045 | S | S.KvaT2ORF29845P (100% identity) | S.Ror23ORF29040P | |
| 29050 | R | KvaT2ORF29845P (99% identity) | Ror23ORF29040P | |
| 29055 | ISL3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1905 | cell division protein DamX | |||
| 1910 | M | M.RspXY1DamP (100% identity) | GATC | M.Ror23DamP |
| 1915 | ribulose-phosphate 3-epimerase | |||
| 6060 | DUF3850 domain-containing protein | |||
| 6065 | M | M.Kva1ORF5795P (100% identity) | M.Ror23ORF6065P | |
| 6070 | replication endonuclease | |||
| 9080 | helix-turn-helix transcriptional regulator | |||
| 9085 | M | M.Sma659ORF12595P (98% identity) | M.Ror23ORF9085P | |
| 9090 | molybdopterin-guanine dinucleotide biosynthesis | |||
| 9455 | phosphohydrolase | |||
| 9460 | M | M.RorTET32DcmP (100% identity) | M.Ror23DcmP | |
| 9465 | V | V.RorTET32DcmP (99% identity) | V.Ror23DcmP | |
| 9470 | drug/metabolite exporter YedA | |||
| 12835 | 73 aa hypothetical protein | |||
| 12840 | M | M.Kpnr197ORF19295P (98% identity) | M.Ror23ORF12840P | |
| 12845 | DUF1317 family protein | |||
| 24700 | BREX-1 system phosphatase PglZ type A | |||
| 24705 | RM | Rpl80511ORFAP (100% identity) | CTRGAG | Ror23ORF24705P |
| 24710 | BREX system P-loop protein BrxC | |||
| 26440 | 117 aa hypothetical protein | |||
| 26445 | M | M.Kgr577ORF26770P (95% identity) | M.Ror23ORF26445P | |
| 26450 | 78 aa hypothetical protein | |||
| 26455 | replication endonuclease | |||
| 26460 | M | M1.KpnN46ORF10700P (98% identity) | M1.Ror23ORF26460P | |
| 26465 | 51 aa hypothetical protein | |||
| 26470 | 75 aa hypothetical protein | |||
| 26475 | M | M2.KpnN46ORF10700P (97% identity) | M2.Ror23ORF26460P | |
| 26480 | 64 aa hypothetical protein | |||
| plasmid p23_A-OXA140 | ||||
| 27745 | IS1 family transposase | |||
| ??? | M | M.SflLIN11ORF24665P (100% identity) | CCWGG | M.Ror23ORF27750P |
| 27755 | R | YpsR1ORFAP (100% identity) | CCWGG | Ror23ORF27750P |
| 27760 | EAL domain-containing protein | |||
| 28395 | 106 aa hypothetical protein | |||
| 28400 | M | M.Ssp15303ORFDP (100% identity) | M.Ror23ORF28400P | |
| 28405 | 202 aa hypothetical protein | |||
| 28520 | DNA-binding protein | |||
| 28525 | M | M.Ssp15303ORFEP (100% identity) | M.Ror23ORF28525P | |
| 28530 | 284 aa hypothetical protein | |||
| plasmid p23_B | ||||
| 29060 | 38 aa hypothetical protein | |||
| 29065 | M | M.SmaQC11ORF52800P (100% identity) | M.Ror23ORF29865P | |
| 29070 | 73 aa hypothetical protein | |||
| plasmid p23_C | ||||
| 29860 | 27 aa hypothetical protein | |||
| 29865 | M | M.SmaQC11ORF52800P (100% identity) | M.Ror23ORF29865P | |
| 29870 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid p23_C | ||||
| 29515 | IS1 family transposase | |||
| 29520 | M | M.Yenp29930ORFAP (78% identity) | M.Ror23ORF29520P | |
| 29525 | DEAD/DEAH box helicase family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23400 | endoribonuclease SymE | |||
| 23405 | R | Ror7885McrBP (100% identity) | Ror23McrBP | |
| 23410 | R | RorCRE01McrCP (100% identity) | Ror23McrCP | |
| 23415 | toxin-antitoxin system, antitoxin component | |||