Mycobacterium shinjukuense JCM 14233 |
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Putative Mycobacterium shinjukuense JCM 14233 RM systems
Ref: Matsumoto,Y. et al. Emerg Microbes Infect 8 (1), 1043-1053 (2019)
REBASE ref # 30021
Complete sequence: 4,504,020 bp
GenBank #: AP022575
REBASE acronym: Msh14233
Org_num: 39118
All begin MSHI_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 21090 | VapC ribonuclease | |||
| ??? | M | M.Mtu70007II (71% identity) | M.Msh14233ORF21100P | |
| 21120 | antitoxin VapB21 | |||
| 21130 | ribonuclease VapC42 | |||
| 21140 | 50 aa hypothetical protein | |||
| 21150 | S | S.Mtu70010ORFAP (79% identity) | S.Msh14233ORF21100P | |
| 21160 | 49 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 21650 | 482 aa hypothetical protein | |||
| 21660 | M | M.Nvu2DndEP (82% identity) | M.Msh14233DndEP | |
| 21670 | 656 aa hypothetical protein | |||
| 21660 | 130 aa hypothetical protein | |||
| 21670 | M | M.AspB13DndDP (73% identity) | M.Msh14233DndDP | |
| 21680 | 511 aa hypothetical protein | |||
| 21670 | 656 aa hypothetical protein | |||
| 21680 | M | M.Nvu2DndCP (83% identity) | M.Msh14233DndCP | |
| 21690 | 384 aa hypothetical protein | |||
| 21680 | 511 aa hypothetical protein | |||
| 21690 | M | M.AspB13DndBP (82% identity) | M.Msh14233DndBP | |
| 21700 | L-cysteine desulfurase | |||
| 21690 | 384 aa hypothetical protein | |||
| 21700 | M | M.MmaH431DndAP (75% identity) | M.Msh14233DndAP | |
| 21710 | transposase | |||
| 24910 | coenzyme F420:L-glutamate ligase | |||
| 24920 | M | M.MspTY59ORF4260P (78% identity) | M.Msh14233ORF24920P | |
| 24930 | NUDIX hydrolase | |||
| 36390 | ABC transporter, permease protein | |||
| 36400 | M | M.Mos1613ORF26155P (84% identity) | M.Msh14233ORF36400P | |
| 36410 | 644 aa hypothetical protein | |||